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SCNpilot_solid_2_scaffold_228_34

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(37817..39262)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6E8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 481.0
  • Bit_score: 925
  • Evalue 2.40e-266
  • rbh
Nitrogen assimilation regulatory protein {ECO:0000313|EMBL:CEG08097.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia feli similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 481.0
  • Bit_score: 925
  • Evalue 3.30e-266
ntrC; nitrogen assimilation regulatory protein NtrC; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG similarity KEGG
DB: KEGG
  • Identity: 93.6
  • Coverage: 481.0
  • Bit_score: 887
  • Evalue 2.20e-255
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1446
ATGCCAGCAGGTAGCATTCTAGTCGCCGACGACGACACCGCGATCCGCACCGTACTCAATCAGGCGTTGATCCGCGCCGGATACGAAGTGCGCCTTACCAGCAACGCCGCCACGCTGTGGCGCTGGGTCAATCAGGGCGAAGGTGATCTCGTCATCACCGATGTGGTGATGCCGGACGAGAATGCCTTCGATCTGCTGCCACGGATCAAGAAACTGCGGCCAAACCTGCCGGTCATCGTCATGAGCGCGCAGAACACCTTCATGACCGCGATCCGCGCCTCCGAGCGCGGCGCCTACGAATATCTGCCGAAGCCGTTCGACCTGAAGGAATTGATCGCGATCGTCGGCCGCGCGCTGGCCGAGCCGAAGGAGCGTCCGGCGGGTATTACGGACGAAGGAGAGTTCGATGCCATCCCACTGGTCGGCCGATCGGCCGCGATGCAGGAAATCTACCGCGTGTTGGCGCGACTGATGCAGACCGACCTGACTGTAATGATTACGGGTGAGTCCGGTACCGGCAAGGAACTGGTTGCGCGCGCCCTGCATGATTATGGCAAGCGGCGAAACGGACCGTTCGTGGCCATCAATATGGCGGCAATCCCGCGCGACCTGATTGAATCCGAACTGTTTGGCCATGAGCGCGGCGCCTTCACCGGCGCCAATACCCGCGCTACTGGCCGCTTCGAACAAGCGGAGGGCGGCACGCTGTTCCTCGACGAGATCGGAGACATGCCGATGGAGGCGCAGACAAGGCTGCTGCGCGTATTACAGCAGGGCGAATACACTACCGTCGGTGGCCGTACCGCGATCAAGACCGATGTACGAATCGTGGCGGCCTCCAACAAGGACCTGCGCATCCTGATCCAGCAGGGTTTATTTCGAGAAGACTTATTCTTCCGCCTCAATGTCGTGCCACTGAGACTTCCACCTTTGCGTGAACGCATCGAGGACCTTCCAGATCTAGCCCGGCACTTTTTTACGCTGGCGGAGAAAGATGGGTTACCGCTCAAGAAGCTTGATACCCAGGCGATGGAGCGTATGAAGCAGCACCGTTGGCCCGGCAACGTGCGTGAACTTGAAAACCTCGCGCGCCGCCTCGCTGCGCTGTACCCGCAGGACGTCATTACCGCTTCCGTCATCGAGGGCGAACTTGCCCCGGCGGCTGCCGCAGGAGCGGCCTCAAACGGTGGGCCGCAGAAGGTTGAAAATCTCGGCAACGCGGTCGAGGGCTATCTGGCGGCGCATTTTGCAGGCTTCCCAAACGCGCTGCCGCCGCCCGGCCTGTACCACCGGATTTTGCGCGAGATGGAGGTTCCGCTGCTCACCGCCGCCCTAGTGGCAACGCGCGGCAACCAGATCCGGGCAGCCGATCTGCTTGGGCTGAACCGGAACACTCTGCGCAAGAAGATTCGAGACCTCGATATTCAGGTCTACCGCACCGGCTAG
PROTEIN sequence
Length: 482
MPAGSILVADDDTAIRTVLNQALIRAGYEVRLTSNAATLWRWVNQGEGDLVITDVVMPDENAFDLLPRIKKLRPNLPVIVMSAQNTFMTAIRASERGAYEYLPKPFDLKELIAIVGRALAEPKERPAGITDEGEFDAIPLVGRSAAMQEIYRVLARLMQTDLTVMITGESGTGKELVARALHDYGKRRNGPFVAINMAAIPRDLIESELFGHERGAFTGANTRATGRFEQAEGGTLFLDEIGDMPMEAQTRLLRVLQQGEYTTVGGRTAIKTDVRIVAASNKDLRILIQQGLFREDLFFRLNVVPLRLPPLRERIEDLPDLARHFFTLAEKDGLPLKKLDTQAMERMKQHRWPGNVRELENLARRLAALYPQDVITASVIEGELAPAAAAGAASNGGPQKVENLGNAVEGYLAAHFAGFPNALPPPGLYHRILREMEVPLLTAALVATRGNQIRAADLLGLNRNTLRKKIRDLDIQVYRTG*