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SCNpilot_solid_2_scaffold_228_39

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(43389..43856)

Top 3 Functional Annotations

Value Algorithm Source
Cyclase/dehydrase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6E3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 155.0
  • Bit_score: 289
  • Evalue 2.80e-75
Ribosome association toxin RatA {ECO:0000313|EMBL:CEG08102.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat sc similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 155.0
  • Bit_score: 289
  • Evalue 3.90e-75
oligoketide cyclase/lipid transport similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 155.0
  • Bit_score: 277
  • Evalue 3.40e-72

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 468
ATGCCACAGTTTTCCAACAAGCGTCGCGTCCGCCACAGCGCATCGCAGATGTTTGATCTTGTCGCGGATGTTGAGCGCTATCCACAGTTCGTGCCACTGTGTCACGCGCTGAGGGTGCGTCAGCGCACGCAGAACCCGGACGGAACGGAGACTATCGTCGCCGATATGACCGTGTCGTTCCAGCTCTTGCGCGAAACCTTCACCAGCAGGGTTACGCTCGATCGACCGAATTTGAAAATCGTGGTCGAGTACCTGAAAGGGCCGTTCTCGAGACTCCAGAATCGCTGGGGATTCGACGCCAAGAGCGAGGACACTTGCGACGTGAATTTTTTCATCGCCTACGAGTTCAAGAGTCGGATGCTCGCGGTGTTGATGGGCGCGATGTTCGACGCCGCTTTCCAGAAGTTCGCGTCGGCGTTCGAGAAGCGCGCGGACGTAGTCTATGGGCTGCCGCGCGCGAACGCTTGA
PROTEIN sequence
Length: 156
MPQFSNKRRVRHSASQMFDLVADVERYPQFVPLCHALRVRQRTQNPDGTETIVADMTVSFQLLRETFTSRVTLDRPNLKIVVEYLKGPFSRLQNRWGFDAKSEDTCDVNFFIAYEFKSRMLAVLMGAMFDAAFQKFASAFEKRADVVYGLPRANA*