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SCNpilot_solid_2_scaffold_228_44

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(49517..50929)

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion outer membrane protein, TolC family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6D8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 470.0
  • Bit_score: 862
  • Evalue 2.40e-247
  • rbh
Type I secretion outer membrane protein, TolC family {ECO:0000313|EMBL:EFI51885.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiace similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 470.0
  • Bit_score: 862
  • Evalue 3.40e-247
TolC family type I secretion outer membrane protein; K12340 outer membrane channel protein similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 470.0
  • Bit_score: 775
  • Evalue 7.10e-222
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
ATGCCGTTTTCAGGGAAAGCCTGGCGCCTGGCGCTGGTCGCAAGCACGGCCCCCATGCTGATTTTGGCCGCCACACCGGTATTGGCGGAAACCATCGAATCCGCCTTGGTCCGTGCCTATCAGGAGAACCCTCAGCTCAATGCCCAGCGTGCTTCCGTCCGTTCTACTGATGAAAACGTGCCGCAGGCGCTGTCTGGCTATCGCCCCCAGATCTCCGTGACAGCGAGCGGCGGATCGCAATATCTCGACACGGTTCTTAAGTCACCGAACGGCTCTGGAGGCGTAAGTCGTGATGAGCGTCACGCCATCAACGGGCCTTGGAGCGCTGGCGCGACGATCACGCAAACCCTTTATAACGGCGGGAGGACCGGAAACCGCACCCGCGCAGCCGAAAGCCAGGTTTCTGCGGCGCGCGAAGGATTGCGCGTGCTGGAGCAAAGTGTGCTCCTCGCCGCCTCGACAATCTACATGGATTATCTTCGGGATTCCGCGATCGTTGAGGTCCAGCGTAGCAACGTCAACGTTCTCGAGCAGACACTCAAGCAAACCCAGGACCGTTTCAACGTCGGCGAGGTGACGCGCACCGACGTGGCACAGTCGCAGGCGCAACTTGCCGCTGGCCGGACTCAATTGCTGGCGGCCGAATCCACACTCACCACCACGCGCGCGAATTACCGCCGCATCATCGGCAGCGATCCGCAGAATCCGCAGCCGGGCTCGCCGGTCGATCGCTACCTGCCGAAAACGCTGGCCCATGCGGTCGATATGGGTCTCGTGGAAAACCCCAACGTCACCGCCGCCATGTACGGCATCGATGTGAGTTATCTGCAGGTCAAGGTAAACGAGGGCGCGCTGTTTCCCACAGTGACGCTACAGGGCAACGTGCAGCAGGCCAATGAACAGGCACTGAGCACATACAAGGCATTCAGTGCCTCGGCGATGGCGAATGTCTCTATTCCGATTTATCAGGGTGGCGCGGAATACGCCTTGATCCGGCAGTCGAAGGAAACATTAGCGCAGCAGCGCCTGAATCTCGATCAGGTCCGCGACCAGACCCGCGCCACTGTGGCGCAAAGCTGGGGCCAATTGGTTGCGACCAAATCACAGGTCGCTTCCGCACAGGCGCAGGTGACGGCTTCTGAGATCGCTCTGAACGGCGTGCGCGAGGAGGCTCGCGTCGGTCAGCGCACCACGCTCGACGTATTGAACGCGCAGCAGGCACTGGTGAATGCACGTATTGCGCTTGTCACAGCGCAACACGACCGTGTCGTTGCCTCCTATACCGTACTCAACGCGGTGGGGCGGCTGTCTCCGGTGACGCTGAAGCTCAAGACTTCAGTCTATGATCCGTCGGTTCATTACCACCAGGTCCGCGATAGCTGGTTCGGCGTCCGCACGCCTGACGGGCGTTAG
PROTEIN sequence
Length: 471
MPFSGKAWRLALVASTAPMLILAATPVLAETIESALVRAYQENPQLNAQRASVRSTDENVPQALSGYRPQISVTASGGSQYLDTVLKSPNGSGGVSRDERHAINGPWSAGATITQTLYNGGRTGNRTRAAESQVSAAREGLRVLEQSVLLAASTIYMDYLRDSAIVEVQRSNVNVLEQTLKQTQDRFNVGEVTRTDVAQSQAQLAAGRTQLLAAESTLTTTRANYRRIIGSDPQNPQPGSPVDRYLPKTLAHAVDMGLVENPNVTAAMYGIDVSYLQVKVNEGALFPTVTLQGNVQQANEQALSTYKAFSASAMANVSIPIYQGGAEYALIRQSKETLAQQRLNLDQVRDQTRATVAQSWGQLVATKSQVASAQAQVTASEIALNGVREEARVGQRTTLDVLNAQQALVNARIALVTAQHDRVVASYTVLNAVGRLSPVTLKLKTSVYDPSVHYHQVRDSWFGVRTPDGR*