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SCNpilot_solid_2_scaffold_285_47

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(54928..56016)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein family 1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8S5_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 362.0
  • Bit_score: 711
  • Evalue 5.30e-202
  • rbh
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:CEG09040.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Af similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 362.0
  • Bit_score: 711
  • Evalue 7.40e-202
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 362.0
  • Bit_score: 669
  • Evalue 7.20e-190
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1089
ATGAGACTTGCTGCAACGTTACGTCACGCTCGGAAGGCCTGTGGAATCGTTCTTGCTGCCGGTGGATTTCTCGCGGTGCTGTCCGGTATTGGAAACTCCGCACAAGCCGCGGACGAGAAAGAGCTGGTCTTCGCCGGTTTCGGCGGCTCGCTTCAGAAATCGCTTCAGGCAACGGTGATTCCTGCCTTCGAGAAGAAGTACGGCGTGAAGGTCGTCTACGTCACTGGCACGTCGAACCAGATCCTTGCCAAGGTGAAGGCGCAGAAGGGCAGCCCGCAGATCGACGTGATCTGGGCGAACGACACCACGCACTATCAAGGCAAGATGGAGAAGCTGTACGCCAAGCTTGATCCCGCAAAGGTAACGAACCTGTCTCAGGTTTATGACTTCGCGAAGGACCGCGACGGCATCGGCGTCGTGATGGGGATTCAGGCGCTCGGCATCGAGTACAACACCCAGGTTTTCAAGGAGAAGGGCTGGGCACCGCCGAGCTCATGGATGGACTTCTGGGACCCGAAATATAAGGGCCATGTCGTCTTCTATAATATGCCGATCGGCTACGCGAACCTGCTGTTCGCCAAGATTGCCGAGATGAATGGCGGCTCTGTCACCAATCTCGAGCCGGCATGGAATAAGATGAAGGAACTCAAGCCGAACGTGTTGGCCTTCATTGATCCGCCCGCGCAGGTCGATGCGTTGTTCGGAACGGGCAGTGCCTGGATCGGCTACAATGGCAGTGCGCGGGTGCATGACTTCGCCGGAACTGGCGCGCCAGTGGCGATGGTGCTGCCGAAGGAAGGCGGCATTCTGTATCCGCAGCAGTTCGATATCGTCGCAGGCGCGCCGCATCCTGATCTTGCGCAAAAGTTCATTAATTTCACCATCAGCGCCGAGGCGCAGAAGATGATTGCGGAGAACCTTCTGCTTGGTCCGGTGAACAAGACCGTCAAGCTCGATGACAAGGCCGCAGCCAAGGTACCGTACGGCGAGAAGGAGGTGAACGCGCTGCTCAACCTCGATATCGCTCCGATCAACCAGAACCTGCAAGCCCTGACGGCGCGCTGGACGGCGATGGTGGGAGGCCACTGA
PROTEIN sequence
Length: 363
MRLAATLRHARKACGIVLAAGGFLAVLSGIGNSAQAADEKELVFAGFGGSLQKSLQATVIPAFEKKYGVKVVYVTGTSNQILAKVKAQKGSPQIDVIWANDTTHYQGKMEKLYAKLDPAKVTNLSQVYDFAKDRDGIGVVMGIQALGIEYNTQVFKEKGWAPPSSWMDFWDPKYKGHVVFYNMPIGYANLLFAKIAEMNGGSVTNLEPAWNKMKELKPNVLAFIDPPAQVDALFGTGSAWIGYNGSARVHDFAGTGAPVAMVLPKEGGILYPQQFDIVAGAPHPDLAQKFINFTISAEAQKMIAENLLLGPVNKTVKLDDKAAAKVPYGEKEVNALLNLDIAPINQNLQALTARWTAMVGGH*