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SCNpilot_solid_2_scaffold_285

Search features with annotation key words

Displaying items 31-55 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_285_31
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36477..37391)
DNA (915bp) protein (305aa)
Methylisocitrate lyase {ECO:0000256|RuleBase:RU361121}; EC=4.1.3.30 {ECO:0000256|RuleBase:RU361121};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiacea
prpB; methylisocitrate lyase PrpB (EC:4.1.3.30) rbh
Methylisocitrate lyase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJ45_AFIFE rbh
SCNpilot_solid_2_scaffold_285_32
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37401..38576)
DNA (1176bp) protein (392aa)
prpC; 2-methylcitrate synthase PrpC (EC:2.3.3.5) rbh
Citrate synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8U5_9BRAD rbh
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease
SCNpilot_solid_2_scaffold_285_33
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38676..40187)
DNA (1512bp) protein (504aa)
prpD2; 2-methylcitrate dehydratase 2 (EC:4.2.1.79); K01720 2-methylcitrate dehydratase [EC:4.2.1.79] rbh
2-methylcitrate dehydratase 2 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NSB5_AFIFE rbh
2-methylcitrate dehydratase 2 {ECO:0000313|EMBL:EKS29113.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53
SCNpilot_solid_2_scaffold_285_34
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40210..40638)
DNA (429bp) protein (143aa)
Thioesterase superfamily protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8U3_9BRAD
Thioesterase superfamily protein {ECO:0000313|EMBL:EFI50581.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.
hypothetical protein
SCNpilot_solid_2_scaffold_285_35
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40917..41141)
DNA (225bp) protein (75aa)
putative NAD-dependent formate dehydrogenase; K00126 formate dehydrogenase, delta subunit [EC:1.2.1.2]
Putative NAD-dependent formate dehydrogenase n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VNA2_RHOPX
Putative NAD-dependent formate dehydrogenase {ECO:0000313|EMBL:ADU42419.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" sou
SCNpilot_solid_2_scaffold_285_36
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41304..42299)
DNA (996bp) protein (332aa)
Transcriptional regulator, LysR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8U2_9BRAD rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EFI50580.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
lysR; transcriptional regulator
SCNpilot_solid_2_scaffold_285_37
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42526..43437
DNA (912bp) protein (304aa)
alpha/beta hydrolase fold protein; K01561 haloacetate dehalogenase [EC:3.8.1.3] rbh
Alpha/beta hydrolase fold protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8U1_9BRAD rbh
Fluoroacetate dehalogenase {ECO:0000313|EMBL:CEG09024.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch
SCNpilot_solid_2_scaffold_285_38
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43434..44369)
DNA (936bp) protein (312aa)
Auxin Efflux Carrier n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8U0_9BRAD rbh
Auxin Efflux Carrier {ECO:0000313|EMBL:EFI50578.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein; K07088 rbh
SCNpilot_solid_2_scaffold_285_39
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44605..45837
DNA (1233bp) protein (411aa)
Major facilitator superfamily MFS_1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8T9_9BRAD rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFI50577.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NL
MFS transporter protein; K08224 MFS transporter, YNFM family, putative membrane transport protein rbh
SCNpilot_solid_2_scaffold_285_40
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45855..47051)
DNA (1197bp) protein (399aa)
Diguanylate cyclase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8T8_9BRAD rbh
Stalked cell differentiation-controlling protein {ECO:0000313|EMBL:CEG09027.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afi
diguanylate cyclase rbh
SCNpilot_solid_2_scaffold_285_41
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47221..49161)
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8T7_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG09028.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein rbh
SCNpilot_solid_2_scaffold_285_42
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49439..50455)
DNA (1017bp) protein (339aa)
2-dehydropantoate 2-reductase {ECO:0000313|EMBL:EFI50568.1}; EC=1.1.1.169 {ECO:0000313|EMBL:EFI50568.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobi
panE; 2-dehydropantoate 2-reductase (EC:1.1.1.169); K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169] rbh
2-dehydropantoate 2-reductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8T0_9BRAD rbh
SCNpilot_solid_2_scaffold_285_43
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50932..52143
DNA (1212bp) protein (404aa)
TRAP-type uncharacterized transport system periplasmic component-like protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8S9_9BRAD rbh
TRAP-type uncharacterized transport system periplasmic component-like protein {ECO:0000313|EMBL:EFI50567.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhiz
hypothetical protein rbh
SCNpilot_solid_2_scaffold_285_44
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52156..52953)
DNA (798bp) protein (266aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8S8_9BRAD rbh
Inner membrane ABC transporter permease protein YdcV {ECO:0000313|EMBL:CEG09037.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source=
ABC transporter permease; K02053 putative spermidine/putrescine transport system permease protein rbh
SCNpilot_solid_2_scaffold_285_45
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52950..53777)
DNA (828bp) protein (276aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8S7_9BRAD rbh
Spermidine/putrescine transport system permease protein PotB {ECO:0000313|EMBL:CEG09038.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;"
potB; spermidine/putrescine transport system permease PotB rbh
SCNpilot_solid_2_scaffold_285_46
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53825..54928)
DNA (1104bp) protein (368aa)
potA1; spermidine/putrescine import ATP-binding protein PotA (EC:3.6.3.31) rbh
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8S6_9BRAD rbh
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000313|EMBL:CEG09039.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source
SCNpilot_solid_2_scaffold_285_47
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54928..56016)
DNA (1089bp) protein (363aa)
Extracellular solute-binding protein family 1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8S5_9BRAD rbh
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:CEG09040.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Af
ABC transporter substrate-binding protein rbh
SCNpilot_solid_2_scaffold_285_48
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56072..56803)
DNA (732bp) protein (244aa)
putative CoA transferase, beta subunit; K01040 glutaconate CoA-transferase, subunit B [EC:2.8.3.12] rbh
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NSD5_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29133.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_solid_2_scaffold_285_49
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56800..57624)
DNA (825bp) protein (275aa)
putative CoA transferase, alpha subunit; K01039 glutaconate CoA-transferase, subunit A [EC:2.8.3.12] rbh
Coenzyme A transferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8S3_9BRAD rbh
3-oxoadipate CoA-transferase subunit A {ECO:0000313|EMBL:CEG09042.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis
SCNpilot_solid_2_scaffold_285_50
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57621..59162)
DNA (1542bp) protein (514aa)
lcfB3; long-chain-fatty-acid--CoA ligase LcfB (EC:6.2.1.3) rbh
AMP-dependent synthetase and ligase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8S2_9BRAD rbh
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CEG09043.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat
SCNpilot_solid_2_scaffold_285_51
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59156..59926)
DNA (771bp) protein (257aa)
Transcriptional regulator, IclR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8S1_9BRAD rbh
Transcriptional regulator, IclR family {ECO:0000313|EMBL:EFI50559.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
transcriptional regulator, IclR family rbh
SCNpilot_solid_2_scaffold_285_52
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60251..60988)
DNA (738bp) protein (246aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8S0_9BRAD rbh
Putative enoyl-CoA hydratase echA6 {ECO:0000313|EMBL:CEG09047.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat
enoyl-CoA hydratase/isomerase family protein rbh
SCNpilot_solid_2_scaffold_285_53
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60961..62133)
DNA (1173bp) protein (391aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8R9_9BRAD rbh
Formyl-coenzyme A transferase {ECO:0000313|EMBL:CEG09048.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scra
L-carnitine dehydratase/bile acid-inducible rbh
SCNpilot_solid_2_scaffold_285_54
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62165..62938)
DNA (774bp) protein (258aa)
Transcriptional regulator, IclR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8R8_9BRAD rbh
Transcriptional regulator KdgR {ECO:0000313|EMBL:CEG09049.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scr
IclR family transcriptional regulator rbh
SCNpilot_solid_2_scaffold_285_55
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63309..63410)
DNA (102bp) protein (34aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8R7_9BRAD
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EFI50555.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
ABC transporter permease; K02050 NitT/TauT family transport system permease protein
Displaying items 31-55 of 55 in total

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