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SCNpilot_solid_2_scaffold_285_45

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(52950..53777)

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8S7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 275.0
  • Bit_score: 520
  • Evalue 1.30e-144
  • rbh
Spermidine/putrescine transport system permease protein PotB {ECO:0000313|EMBL:CEG09038.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 275.0
  • Bit_score: 520
  • Evalue 1.80e-144
potB; spermidine/putrescine transport system permease PotB similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 275.0
  • Bit_score: 483
  • Evalue 5.60e-134
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGAAGTTGCATGCCGGCCTTCTTCTGGTGCCTGCGGTTTTGTTCTATGCAGTATTGTTTGTCTGGCCTCTCATCATCTCGACATGGGGAAGTTTCACGCCCACGGGGAAACTCTCCCTCCAAACCTATACGCAGTTTTTCGCGGACGAGTTCTATCGTTCCGTGTTGTGGCGCTCCCTCCGGATCAGCGCCATCACGACCCTGATGACGCTAATTATAGGCTATCCAATTGCGGTCTATCTGTCGCAAAGCTGGCGCAAGGGTCGCTCGCTGGTGGTGTTTCTTGTCATTGCCCCGATGTTCGTGAGCGCGGTGGTCCGTTCCTATGGCTGGATCATCATCCTGGGGCCAAACGGACTCTTGAGTTCTTTCACCAAGGCCATTGGCCTGCCAATGGGGCATCTTCTGTACAGCGAAGCAGGCGTTATTATCGCACTGACGCATGTATTCCTGCCCTTCATGGTGATCGCACTTGCGGGCTCGCTGCAACAGATCGATCCCTCACTGGCGCGCGCCGCGCAGATTCTCGGTGCCAACAGATTTCAGGTATTCGTGCGGGTGATCCTCCCGCTGACATTGCCGGGCATTTCCGCCGGGTCGGTCATCGTGTTTTGTCTCGCAGCGAGCGGTTTTGTGACGCCAGCACTTGTCGGCGGTGCCGCGGTGCCGGTAATGCCATATCTCGTGTATAAGGAAGGCTTGCTGGTGCTGAACTGGCCGTTTGCATCGGCAGTCGCGTTGATCCTGCTAGCCGCAACGGCACTTGTCACAGCGATCTACACATTCGCGATTCGTGACGCAGCCAGCAGAAGGAGCGTCGTGCGATGA
PROTEIN sequence
Length: 276
MKLHAGLLLVPAVLFYAVLFVWPLIISTWGSFTPTGKLSLQTYTQFFADEFYRSVLWRSLRISAITTLMTLIIGYPIAVYLSQSWRKGRSLVVFLVIAPMFVSAVVRSYGWIIILGPNGLLSSFTKAIGLPMGHLLYSEAGVIIALTHVFLPFMVIALAGSLQQIDPSLARAAQILGANRFQVFVRVILPLTLPGISAGSVIVFCLAASGFVTPALVGGAAVPVMPYLVYKEGLLVLNWPFASAVALILLAATALVTAIYTFAIRDAASRRSVVR*