ggKbase home page

SCNpilot_solid_2_scaffold_285_44

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(52156..52953)

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8S8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 265.0
  • Bit_score: 490
  • Evalue 8.20e-136
  • rbh
Inner membrane ABC transporter permease protein YdcV {ECO:0000313|EMBL:CEG09037.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 265.0
  • Bit_score: 490
  • Evalue 1.20e-135
ABC transporter permease; K02053 putative spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 265.0
  • Bit_score: 456
  • Evalue 4.10e-126
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGATGAATCGCATTCTCACAGCCTATGTGGCGTTCATATCGGCTTTGATGATTTTGCCAATCGCGATCGTGATTGCGGCGTCAATCAACTCAGCGGCCTATCTCTCATTTCCGCCTGCCGGCTTTAGCACCATCTGGTACAAGGAGGTGCTGACTGACCCAACCTGGAGCGGTTCGCTGTGGCTGACGCTGAAGATCGGTATGGCAGTCTCTATGTTATCGACCGTGCTTGGTGTCGCGGCAGCGCTGGGCTTGCGTGCAGTGAGCGACACGTGGTCCGCCGTGCTGCAAACCTTCTTCCTGTCGCCATTGATGCTGCCGACGGTACTGATTGGGTTGTCGCTGATGCAGCTTTATCAGTCGCTTGGCATTCGGGCTTCGGTGCTGACAGTTACCCTCGGCCAGCTTCTGATCGCATGCCCCTACGTGATCCGCCTCGTCCTCGCAAGTTTCAACGGCATCGACCCGCGGCTGGAGCGGGCGGCGTCGATTCTGGGCGCCAACCCCATTCGTGTGTTCTGGCACGTGACTTTTCCGTTGATCCGGCACGGGGTGCTGGCAGGCTTTCTGTTCAGTTTCATCGTATCGCTGGATGACGTGAATATCGCGCTTTTTCTCTCCGACGTTCACACCACGCCACTCCCGGTGCAGTTGTTCAGCTACATCGAGCAGAACGCGGACTCGTTGGGAGCCGCGGCGGCATCCTTGCTGGTTCTGCTGGCGTGCGGAGCGGTCTTCATATGCGACCGGCTGGTCGGCATCGAATGGCTGTTCGGCGCGAAGCAGCGCTCAGGCTAA
PROTEIN sequence
Length: 266
MMNRILTAYVAFISALMILPIAIVIAASINSAAYLSFPPAGFSTIWYKEVLTDPTWSGSLWLTLKIGMAVSMLSTVLGVAAALGLRAVSDTWSAVLQTFFLSPLMLPTVLIGLSLMQLYQSLGIRASVLTVTLGQLLIACPYVIRLVLASFNGIDPRLERAASILGANPIRVFWHVTFPLIRHGVLAGFLFSFIVSLDDVNIALFLSDVHTTPLPVQLFSYIEQNADSLGAAAASLLVLLACGAVFICDRLVGIEWLFGAKQRSG*