ggKbase home page

SCNpilot_solid_2_scaffold_290_25

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 29953..32370

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase/phosphodiesterase with MHYT sensor n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8M9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 806.0
  • Bit_score: 1419
  • Evalue 0.0
  • rbh
Cyclic di-GMP phosphodiesterase Gmr {ECO:0000313|EMBL:CEG08608.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Ca similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 806.0
  • Bit_score: 1419
  • Evalue 0.0
diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 805.0
  • Bit_score: 1220
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2418
ATGCTGAGAATTATAACCTGCCTGCAAACCCAGCACGACTGGAGGTTAGTTTTTCTGGCGGCGAGCGTTTGTCTGCTGGCCAGTTTTGCTGCCGTCAGCATGTATCAGCGCGCGACTGTCGGTGACAAGACCACGCCCCGCCTGTTCTGGGCACTCACAGCCGGTGTTGTGGGCGGCTGCGGCGTTTGGGCGACACACTTCATCGGAATGCTCGCCTACGCGCCAGGAATACCGATCTCGTTCGATTTTCTGATGACGGTTGCCTCGCTCGGCGTCGTAGTTGTGATGATGGCCGGTGGCTTTATGATCGCAACCTATGGCGATCAGATCTGGACGCCATTGATCGGTGGCGTGATCCTTGGTGTGGCCACCTCCCTGATGCACTATCTCGAAATTCACTCGTTGCGGATGCGGGCTGATATTGCATGGGTGCCGAGCCTGTTGGCTGTTTCGATCGCGTGCGGTGTAGGATTTAGTGCGCTTTCCCTCGCTGTCGCGCGCCGTGGCGAGACCGTGTGGTTTGGTGCAATCAGCGTGGGATTGCTGGTGGTGGCGATCCTGTCCGGTCATTTCATCGCCATAAGCGCGATGGAATTGGTTCCGGACATGACGCCGACCTCCCCGAATGTCGGGCTGTCTCCAATGGCTCTTTCGGTGGGCGTGGCGTCGGTGATGGCGGCTTTCGTCGCCGCCTGTGGGATCAGCGCGATTTCCGATCGCCGCAGCCGCCGCAGCATCAGCGAGCGAAATATCCAGCTCAACGCAGCCATCAATAACATGAGGCAAGGCCTGTGTATGTTTGGGCCGGATAACTGTCTGCAGTTGTGGAATGAAAAATACGTCGAGATGTACAGAGTCGCGCCGGAAGAGATTCGCGCGGGGATGACGGTCGATGAGATGTTCGCGGCGAGGAAAAAAGCCGGAACGATTGTCAGGGATCTGGATTCCTACTCATCGCATCTGCGGAATTCGGTCGAGAACCGTGAATTTACCAAGTGGATTCACGAATTGGTGGACGGCCGCACCATCAGCGTGTCGTACCAGTCGATGGAGAATGGCGGCTGGGTCGGAACGCACGAGGACATCACCGAACAGTGCAAGAGCGAGGCCCAAATCCAGTACCTCGCCCAGCACGATTCACTGACCGGATTGTTCAACCGGGCGGCATTCAATGAGCATGTTCACAAGATTTGGGAAGGAGCGATCCGGGAGCAGCGTTCCTTTACCATTCTGAGTATCGATATCGACCGCTTCGGCGAGATCAATGACACCTACGGACATAGTGCAGGCGATACGTTCCTGGATGAAGCTGCGCGCCGCCTGCAGGCCGCATGCGGGAGTGCGTTCATCGCGCGCCTTGGCGGCGATGAATTCATGATTGTTTCGTCCGAAGGTGAACAGCCGGCTCGCGCAGGGGATATATGTACGCGCGTCCTGACCGCCTTCGAGATGACGTTCCACATCGACGGCCATCCCATTCACAGCGGTTGCACGGTTGGCGTTTCTATCTTCCCGCAGGATGGAGCAGATGTAGAAACGCTCATCGCCAATGCCGACGTTGCGCTCTATCGCGCCAAGAAGGAGGAACGGGGGTCTGTCCGCTTCTTTGAGCCGGCGATGGACAGGCAACTTCGCGAGAAACGCGCGTTATTGCAGGACCTGGGTGTTGCCATTGAAAACGGACAGCTTGAGCTGCATTACCAGCCTCAGGGCAGCACGGATGGAAGCCCGTTCGGCTTTGAAACGCTGGTGCGCTGGCGTCATCCGGCCAGGGGATTGATTGGACCTGGTGCCTTCATTCCGCTGGCAGAGGAAACCGGTTCGATTGTCGCTGTCGATACGTGGATTTTGAGCGAAGCCTGCCGTGAGGCGGCAAGCTGGCCGAACCCACTGCAGATAGCGGTCAACGTGTCGCCGATGAGTTTTCAGCAAAACGATCTGCCGGGGCTTATCCATGCGATCCTGCTGGAAACGGGTCTGAATCCCAAGCGGCTTGAGATCGAGATTACCGAAGGCGTGCTGATGCAGGATTTTTCGCATGCCTGTTCGATCCTGCGCCGCATCAAGAATCTGGGCGTCCGCATCGCGATGGATGATTTCGGCACCGGCTATTCGTCGCTATCGTATCTGCAGTCTTTTCCGTTCGACAAGATCAAGATCGACCAGACCTTTGTCGCCCAGATCCACAAGAACGTGCAGTCGTCAGCCATCATTCGCGCGATCATCAGTCTCGGAGAGGCGCTTAACCTCGGCGTGATCGCCGAGGGTGTGGAGACGGAAGATCAGCGCGAATTCCTTGCCGAAGCTGGATGCACCGAGATGCAGGGATATCTGCTTGGCCGTCCGCAACCGATTGCCGCCTACAATCATGTCATCGGCCGGCCATCAGCGGCGCCACGGAAGGCTCTCGCCGGATAG
PROTEIN sequence
Length: 806
MLRIITCLQTQHDWRLVFLAASVCLLASFAAVSMYQRATVGDKTTPRLFWALTAGVVGGCGVWATHFIGMLAYAPGIPISFDFLMTVASLGVVVVMMAGGFMIATYGDQIWTPLIGGVILGVATSLMHYLEIHSLRMRADIAWVPSLLAVSIACGVGFSALSLAVARRGETVWFGAISVGLLVVAILSGHFIAISAMELVPDMTPTSPNVGLSPMALSVGVASVMAAFVAACGISAISDRRSRRSISERNIQLNAAINNMRQGLCMFGPDNCLQLWNEKYVEMYRVAPEEIRAGMTVDEMFAARKKAGTIVRDLDSYSSHLRNSVENREFTKWIHELVDGRTISVSYQSMENGGWVGTHEDITEQCKSEAQIQYLAQHDSLTGLFNRAAFNEHVHKIWEGAIREQRSFTILSIDIDRFGEINDTYGHSAGDTFLDEAARRLQAACGSAFIARLGGDEFMIVSSEGEQPARAGDICTRVLTAFEMTFHIDGHPIHSGCTVGVSIFPQDGADVETLIANADVALYRAKKEERGSVRFFEPAMDRQLREKRALLQDLGVAIENGQLELHYQPQGSTDGSPFGFETLVRWRHPARGLIGPGAFIPLAEETGSIVAVDTWILSEACREAASWPNPLQIAVNVSPMSFQQNDLPGLIHAILLETGLNPKRLEIEITEGVLMQDFSHACSILRRIKNLGVRIAMDDFGTGYSSLSYLQSFPFDKIKIDQTFVAQIHKNVQSSAIIRAIISLGEALNLGVIAEGVETEDQREFLAEAGCTEMQGYLLGRPQPIAAYNHVIGRPSAAPRKALAG*