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SCNpilot_solid_2_scaffold_290

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_290_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(79..1218)
DNA (1140bp) protein (380aa)
Phage integrase family protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07SQ5_RHOP5 rbh
phage integrase family protein rbh
Phage integrase family protein {ECO:0000313|EMBL:ABJ05029.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseu
SCNpilot_solid_2_scaffold_290_trna_1
unknown

Not on your lists

comp(1409..1480)
DNA (72bp)
transferRNA
SCNpilot_solid_2_scaffold_290_2
unknown

Not on your lists

1582..1761
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_solid_2_scaffold_290_3
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1780..2913)
DNA (1134bp) protein (378aa)
ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1); K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] rbh
Ribonucleoside-diphosphate reductase beta subunit NrdB {ECO:0000313|EMBL:AEI06035.1}; EC=1.17.4.1 {ECO:0000313|EMBL:AEI06035.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; R
Ribonucleoside-diphosphate reductase subunit beta n=2 Tax=Oligotropha carboxidovorans RepID=B6JGZ6_OLICO rbh
SCNpilot_solid_2_scaffold_290_4
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3062..5971)
DNA (2910bp) protein (970aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Br
nrdA; ribonucleoside-diphosphate reductase alpha subunit NrdA (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] rbh
Ribonucleoside-diphosphate reductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8K9_9BRAD rbh
SCNpilot_solid_2_scaffold_290_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6523..7197
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NE16_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28842.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein; K09765 hypothetical protein rbh
SCNpilot_solid_2_scaffold_290_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7286..8014
DNA (729bp) protein (243aa)
Putative signal-transduction protein with CBS domains n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J0D5_RHOP2
signal-transduction protein
Putative signal-transduction protein with CBS domains {ECO:0000313|EMBL:ABD06075.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomon
SCNpilot_solid_2_scaffold_290_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8561..10906
DNA (2346bp) protein (782aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:S
metE; 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase (EC:2.1.1.14); K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] rbh
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8L1_9BRAD rbh
SCNpilot_solid_2_scaffold_290_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10962..11183)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8L2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG08626.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_290_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11356..12207)
DNA (852bp) protein (284aa)
Transcriptional regulator, IclR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8L3_9BRAD rbh
Acetate operon repressor {ECO:0000313|EMBL:CEG08625.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch d
IclR family transcriptional regulator rbh
SCNpilot_solid_2_scaffold_290_10
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12319..13944
DNA (1626bp) protein (542aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8L4_9BRAD rbh
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:EFI50899.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
glucose-methanol-choline oxidoreductase rbh
SCNpilot_solid_2_scaffold_290_11
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13976..15298
DNA (1323bp) protein (441aa)
General substrate transporter n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8L5_9BRAD rbh
General substrate transporter {ECO:0000313|EMBL:EFI50900.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
major facilitator family transporter rbh
SCNpilot_solid_2_scaffold_290_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15388..16305)
DNA (918bp) protein (306aa)
phosphate acetyl/butaryl transferase family; K00625 phosphate acetyltransferase [EC:2.3.1.8] rbh
Phosphate butyryltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8L6_9BRAD rbh
Phosphate acetyltransferase {ECO:0000313|EMBL:CEG08622.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratc
SCNpilot_solid_2_scaffold_290_13
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16305..17087)
DNA (783bp) protein (261aa)
Transcriptional regulator, IclR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8L7_9BRAD rbh
Transcriptional regulator, IclR family {ECO:0000313|EMBL:EFI50902.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
IclR family transcriptional regulator rbh
SCNpilot_solid_2_scaffold_290_14
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17246..19021
DNA (1776bp) protein (592aa)
sulfoacetaldeyde acetyltransferase; K03852 sulfoacetaldehyde acetyltransferase [EC:2.3.3.15] rbh
Sulfoacetaldehyde acetyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8L8_9BRAD rbh
Sulfoacetaldehyde acetyltransferase {ECO:0000313|EMBL:CEG08620.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Ca
SCNpilot_solid_2_scaffold_290_15
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19104..19979)
DNA (876bp) protein (292aa)
Transcriptional regulator, LysR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8L9_9BRAD rbh
HTH-type transcriptional regulator GltC {ECO:0000313|EMBL:CEG08619.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis
LysR family transcriptional regulator rbh
SCNpilot_solid_2_scaffold_290_16
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20125..21102
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8M0_9BRAD rbh
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:CEG08618.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source
hypothetical protein rbh
SCNpilot_solid_2_scaffold_290_17
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21151..21687
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8M1_9BRAD rbh
Tripartite tricarboxylate transporter TctB family protein {ECO:0000313|EMBL:CEG08617.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" so
hypothetical protein rbh
SCNpilot_solid_2_scaffold_290_18
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21703..23232
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8M2_9BRAD rbh
Tripartite tricarboxylate transporter TctA family protein {ECO:0000313|EMBL:CEG08616.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" so
putative transmembrane protein; K07793 putative tricarboxylic transport membrane protein rbh
SCNpilot_solid_2_scaffold_290_19
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23440..24723
DNA (1284bp) protein (428aa)
Major facilitator superfamily MFS_1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8M3_9BRAD rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFI50908.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NL
major facilitator superfamily protein rbh
SCNpilot_solid_2_scaffold_290_20
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24798..26225
DNA (1428bp) protein (476aa)
sucD1; succinate-semialdehyde dehydrogenase (EC:1.2.1.76) rbh
Aldehyde Dehydrogenase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8M4_9BRAD rbh
Sulfoacetaldehyde dehydrogenase (Acylating) {ECO:0000313|EMBL:CEG08614.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia f
SCNpilot_solid_2_scaffold_290_21
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26238..27365
DNA (1128bp) protein (376aa)
Succinate--CoA ligase (ADP-forming) {ECO:0000313|EMBL:EFI50910.1}; EC=6.2.1.5 {ECO:0000313|EMBL:EFI50910.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhi
sucC1; succinyl-CoA ligase subunit beta (EC:6.2.1.5); K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] rbh
Succinate--CoA ligase (ADP-forming) n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8M5_9BRAD rbh
SCNpilot_solid_2_scaffold_290_22
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27362..28252
DNA (891bp) protein (297aa)
sucD2; succinyl-CoA ligase [ADP-forming] subunit alpha (EC:6.2.1.5); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] rbh
CoA-binding domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8M6_9BRAD rbh
CoA-binding domain protein {ECO:0000313|EMBL:EFI50911.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_solid_2_scaffold_290_23
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28276..28491)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NMS5_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28825.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_solid_2_scaffold_290_24
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28949..29695
DNA (747bp) protein (249aa)
Cyclic nucleotide-binding protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JGP5_OLICO rbh
Crp family transcriptional regulator rbh
Transcriptional regulator, Crp family protein {ECO:0000313|EMBL:AEI06054.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source=
SCNpilot_solid_2_scaffold_290_25
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29953..32370
DNA (2418bp) protein (806aa)
Diguanylate cyclase/phosphodiesterase with MHYT sensor n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8M9_9BRAD rbh
Cyclic di-GMP phosphodiesterase Gmr {ECO:0000313|EMBL:CEG08608.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Ca
diguanylate cyclase rbh
SCNpilot_solid_2_scaffold_290_26
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32380..33780)
DNA (1401bp) protein (467aa)
FAD dependent oxidoreductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8N0_9BRAD rbh
Lysine/ornithine N-monooxygenase {ECO:0000313|EMBL:CEG08607.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat s
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
SCNpilot_solid_2_scaffold_290_27
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33784..34764)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NMS0_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28820.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
putative oxidoreductase rbh
SCNpilot_solid_2_scaffold_290_28
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35482..37287
DNA (1806bp) protein (602aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NK65_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28819.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
chemotaxis sensory transducer protein rbh
SCNpilot_solid_2_scaffold_290_29
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37309..38571)
DNA (1263bp) protein (421aa)
bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC:2.6.1.62); K00833 adenosylmethionine-8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] rbh
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8N3_9BRAD rbh
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:CEG08602.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" s
Displaying items 1-30 of 57 in total

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