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SCNpilot_solid_2_scaffold_312_15

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 10618..11016

Top 3 Functional Annotations

Value Algorithm Source
Succinate dehydrogenase subunit D n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE64_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 120.0
  • Bit_score: 133
  • Evalue 1.30e-28
Succinate dehydrogenase subunit D {ECO:0000313|EMBL:EIL97755.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhoda similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 120.0
  • Bit_score: 133
  • Evalue 1.80e-28
sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 123.0
  • Bit_score: 131
  • Evalue 1.50e-28

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 399
ATGGATAGATACCGCGTTCAATCCCCGCTTGGTCGCGCAACCGGGCTTGGTTCTGCCAAGGGCGGTTTTACTCATTGGTGGGTCGAAAGGGTAACGGCCGTTGCACTTGGTCCTCTCACCGTGTGGTTCGCGGCCTCACTAATAGCGCATACCAATGGCGACTATCAGACACTCATTGTCTGGCTAAGCGCACCGGTTACTACAGTGCTGATGATCCTCCTGTTGTTTGCCTTATTTTGGCATATGGCACTTGGCCTTCAGGTCGTCGTCGATGACTACGTCCATACCGAAGCGAAAATCTGGATGCTGTTGGCAATACGCTTCGCGTGCGTCACCCTGGCAACGGTTGGCATCATGGCCATGCTGTACATCGCCTTCGGCAGGGAGCCGCACCTTTGA
PROTEIN sequence
Length: 133
MDRYRVQSPLGRATGLGSAKGGFTHWWVERVTAVALGPLTVWFAASLIAHTNGDYQTLIVWLSAPVTTVLMILLLFALFWHMALGLQVVVDDYVHTEAKIWMLLAIRFACVTLATVGIMAMLYIAFGREPHL*