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SCNpilot_solid_2_scaffold_312

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_312_1
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(188..1537)
DNA (1350bp) protein (450aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylo
hemN2; coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] rbh
Coproporphyrinogen-III oxidase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G115_9BRAD rbh
SCNpilot_solid_2_scaffold_312_2
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1701..2201)
DNA (501bp) protein (167aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBT3_OLICO
activator of Hsp90 ATPase 1 family protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07636.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
SCNpilot_solid_2_scaffold_312_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2275..2685)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002EE4C36
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_solid_2_scaffold_312_4
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2817..3500)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003644A29
Uncharacterized protein {ECO:0000313|EMBL:EZQ15023.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzan
hypothetical protein; K07322 regulator of cell morphogenesis and NO signaling
SCNpilot_solid_2_scaffold_312_5
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3552..5258)
DNA (1707bp) protein (569aa)
Nitric-oxide reductase subunit B n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTZ6_9GAMM
Nitric-oxide reductase {ECO:0000313|EMBL:EZQ15022.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzane
nitric oxide reductase large subunit
SCNpilot_solid_2_scaffold_312_6
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5255..6226)
DNA (972bp) protein (324aa)
Cytochrome c2 n=1 Tax=Rhodanobacter denitrificans RepID=M4NG81_9GAMM
Cytochrome C {ECO:0000313|EMBL:EZQ15021.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
cytochrome c2
SCNpilot_solid_2_scaffold_312_7
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6223..6498)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYM9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EZQ15020.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzan
hypothetical protein
SCNpilot_solid_2_scaffold_312_8
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6684..7217
DNA (534bp) protein (178aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B6G3_PARDP
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:EZQ15019.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
BadM/Rrf2 family transcriptional regulator; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
SCNpilot_solid_2_scaffold_312_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7523..7744)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3D3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07041.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_312_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7738..8019)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3D4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07040.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_312_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8000..8500)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3D5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07039.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
SCNpilot_solid_2_scaffold_312_12
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8570..8890
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3D6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52466.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_solid_2_scaffold_312_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9343..10197
DNA (855bp) protein (285aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomo
succinate dehydrogenase and fumarate reductase iron-sulfur protein (EC:1.3.5.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1]
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE66_9GAMM rbh
SCNpilot_solid_2_scaffold_312_14
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10211..10618
DNA (408bp) protein (136aa)
succinate dehydrogenase subunit C (EC:1.3.5.1); K00241 succinate dehydrogenase cytochrome b556 subunit
Succinate dehydrogenase subunit C {ECO:0000313|EMBL:ABI56681.1}; EC=1.3.5.1 {ECO:0000313|EMBL:ABI56681.1};; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothior
Succinate dehydrogenase subunit C n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A906_ALKEH
SCNpilot_solid_2_scaffold_312_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10618..11016
DNA (399bp) protein (133aa)
Succinate dehydrogenase subunit D n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE64_9GAMM
Succinate dehydrogenase subunit D {ECO:0000313|EMBL:EIL97755.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhoda
sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein
SCNpilot_solid_2_scaffold_312_16
Legionella massiliensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11057..11503
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Legionella shakespearei RepID=UPI00037CA8D2
Inosine 5'-monophosphate dehydrogenase {ECO:0000313|EMBL:CEE15190.1}; Putative manganese-dependent inorganic pyrophosphatase {ECO:0000313|EMBL:CDZ79452.1}; TaxID=1034943 species="Bacteria; Proteobacte
hypothetical protein
SCNpilot_solid_2_scaffold_312_17
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11555..11884
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAR0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG09818.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
cupin
SCNpilot_solid_2_scaffold_312_18
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12108..12998)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBV1_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07618.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
SCNpilot_solid_2_scaffold_312_19
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13161..15440
DNA (2280bp) protein (760aa)
Nitrous oxide expression regulator, NosR n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAR2_9BRAD rbh
Nitrous oxide expression regulator, NosR {ECO:0000313|EMBL:EFI49989.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;
nosR; regulatory protein NosR rbh
SCNpilot_solid_2_scaffold_312_20
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15458..17386
DNA (1929bp) protein (643aa)
Nitrous-oxide reductase {ECO:0000256|HAMAP-Rule:MF_00716}; EC=1.7.2.4 {ECO:0000256|HAMAP-Rule:MF_00716};; N(2)OR {ECO:0000256|HAMAP-Rule:MF_00716}; N2O reductase {ECO:0000256|HAMAP-Rule:MF_00716}; Fla
nosZ; nitrous-oxide reductase NosZ (EC:1.7.2.4); K00376 nitrous-oxide reductase [EC:1.7.2.4] rbh
Nitrous-oxide reductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAR3_9BRAD rbh
SCNpilot_solid_2_scaffold_312_21
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17398..18762
DNA (1365bp) protein (455aa)
Copper-binding periplasmic protein NosD n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBU8_OLICO rbh
nosD; copper-binding periplasmic protein NosD; K07218 nitrous oxidase accessory protein rbh
Copper-binding periplasmic protein NosD {ECO:0000313|EMBL:AEI07621.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligo
SCNpilot_solid_2_scaffold_312_22
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18759..19667
DNA (909bp) protein (303aa)
Copper transport ATP-binding protein NosF n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBU7_OLICO rbh
copper transport ATP-binding protein NosF; K01990 ABC-2 type transport system ATP-binding protein rbh
Copper transport ATP-binding protein NosF {ECO:0000313|EMBL:AEI07622.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oli
SCNpilot_solid_2_scaffold_312_23
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19664..20491
DNA (828bp) protein (276aa)
Membrane protein NosY n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBU6_OLICO rbh
membrane protein NosY; K01992 ABC-2 type transport system permease protein rbh
Membrane protein NosY {ECO:0000313|EMBL:AEI07623.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovo
SCNpilot_solid_2_scaffold_312_24
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20488..21033
DNA (546bp) protein (182aa)
NosL family protein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBU5_OLICO rbh
NosL family protein rbh
NosL family protein {ECO:0000313|EMBL:AEI07624.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovora
SCNpilot_solid_2_scaffold_312_25
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21045..22046
DNA (1002bp) protein (334aa)
ApbE family lipoprotein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAR8_9BRAD rbh
Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:CEG09810.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis
ApbE family protein; K03734 thiamine biosynthesis lipoprotein rbh
SCNpilot_solid_2_scaffold_312_26
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22133..22522
DNA (390bp) protein (130aa)
Cytochrome c class I n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAR9_9BRAD
Cytochrome c class I {ECO:0000313|EMBL:EFI49996.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
cycA; cytochrome c2; K08738 cytochrome c
SCNpilot_solid_2_scaffold_312_27
unknown

Not on your lists

comp(22336..22821)
DNA (486bp) protein (162aa)

This feature has no annotations

SCNpilot_solid_2_scaffold_312_28
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23017..23712
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQL3_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29750.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_solid_2_scaffold_312_29
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23715..25691
DNA (1977bp) protein (659aa)
Heavy metal translocating P-type ATPase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKY0_AFIFE rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EKS29751.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia fel
heavy metal translocating P-type ATPase rbh
SCNpilot_solid_2_scaffold_312_30
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25744..27075
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NHG0_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29752.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
Displaying items 1-30 of 67 in total

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