ggKbase home page

SCNpilot_solid_2_scaffold_312_57

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(52001..52849)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000 similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 282.0
  • Bit_score: 493
  • Evalue 1.50e-136
aroE; shikimate dehydrogenase AroE (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 275.0
  • Bit_score: 448
  • Evalue 1.60e-123
  • rbh
Shikimate dehydrogenase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7N2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 282.0
  • Bit_score: 493
  • Evalue 1.00e-136
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 849
ATGGGCGCAAATTCTGTAAGCGCAGGTCCTGCCGCATGCCTGATCGGGTGGCCGGCCGCGCATTCGCGCTCGCCGATCATTCACAAATACTGGCTGAAGCAGTTCGGCATCATGGGCGACTATCGCATCGAGGCGGTGGAGCCTGCGGCTTTTGCAGATTTCATTGGCTCGCTTGCTGCGCGCGGTTATCGTGGGGCGAACGTCACGATCCCGCACAAGGAGCAGGCGCTCGCGCTCTCGACACCGGATGCGCGCGCTCGTGCGGTGGGGGCTGCCAACACGCTATACTTTGCGAACGGCAGCCTGCATTCGACCAATACCGACGTCGAGGGGTTCATCGGCAATCTTGATGCGTCTGCGCCGGGCTGGGATGCGAATGGCGAAGCCGTAGTGCTGGGCGCCGGCGGCTCGGCGCGCGCGGTGGTGTTCGGACTTCTGGATCGCGGCGTGGCGCGCATTCATCTTGTCAATCGCAGCCATGAGCGCGCGCAGATGCTGGCGCGGCCATATGGCGATCGGGTTCATGTTGCCCCGTGGCGCGACGTGGATGCGATTTTGCCGAAGGCGGGACTGGTGGTGAACACGACCTCGCTCGGTATGCAAGGGCAGCCGCTTTTGCCGTTTGACGCATCTGCCTTGCGTGCAGATGCGACGGTCGCCGATCTTGTCTACGTGCCGCTCGAAACCACCTTGTTGAAGGCGGCGAAGGCGCGCGGTCTGCGGACCGCCGACGGTCTCGGCATGTTGTTGCATCAGGCCGTGCGCGGATTTGAGTTGTGGTTCGGCAAGCGTCCCCAAGTGACGCCGGAATTGCGCGCGCTGGTCGAGGCTGATCTCACCTCTGTGTGA
PROTEIN sequence
Length: 283
MGANSVSAGPAACLIGWPAAHSRSPIIHKYWLKQFGIMGDYRIEAVEPAAFADFIGSLAARGYRGANVTIPHKEQALALSTPDARARAVGAANTLYFANGSLHSTNTDVEGFIGNLDASAPGWDANGEAVVLGAGGSARAVVFGLLDRGVARIHLVNRSHERAQMLARPYGDRVHVAPWRDVDAILPKAGLVVNTTSLGMQGQPLLPFDASALRADATVADLVYVPLETTLLKAAKARGLRTADGLGMLLHQAVRGFELWFGKRPQVTPELRALVEADLTSV*