ggKbase home page

SCNpilot_solid_2_scaffold_322_34

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(41367..42086)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NDH6_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 96.7
  • Coverage: 239.0
  • Bit_score: 460
  • Evalue 1.40e-126
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28662.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 239.0
  • Bit_score: 460
  • Evalue 2.00e-126
transcriptional activator protein CopR; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 226.0
  • Bit_score: 428
  • Evalue 1.90e-117
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGCTGACAGCAACCAATCCTGAACCGACTTCGTCGCAGATGCGCCTGCTCATTATTGAAGACGATCGCGAATCTGCGGAATACCTCGCGAAAGCGTTTCGCGAGGTCGGCCACGTTGCCGAATTGGCGGGCGATGGCGAGGAAGGGCTGGCGTTGGCCCAGTCCGGCGATTACGACGTGCTGGTGGTTGACCGCATGCTGCCCAAGCGCGACGGCCTGTCGGTGATTGGCGCGCTGCGGGAGAAGGGCGATACCACGCCTGCGCTGATCCTGTCCGCGCTCGGCCAGGTTGATGACCGCATCAAGGGCCTGCGCGCCGGTGGTGATGACTACCTGCCGAAACCTTATGCATTCGCCGAACTGCTGGCGCGGGTCGAGGTGCTGTCGCGCCGTCGCGGCGGGCCGTCGGAGGAAACCAGTTATCGCGTCGGCGATCTCGAACTTGACCGGCTGTCACATCAGGTCAGGCGCGGCGCGACCGAGATTACGCTGCAGCCGCGCGAATTCCGCCTGCTCGAATATCTGATGAAACATGCAGGGCAGGTGGTGACGCGCACCATGCTGCTGGAGAATGTGTGGGATTATCACTTCGATCCGCAGACCAACGTCATTGACGTACATATCTCGCGGTTGCGTTCGAAGATTGACAAGGGGCAGGAGCATCCGCTGCTGCACACCATTCGCGGCGCCGGATACATGATCCGCGATGGAATGCGATAA
PROTEIN sequence
Length: 240
MLTATNPEPTSSQMRLLIIEDDRESAEYLAKAFREVGHVAELAGDGEEGLALAQSGDYDVLVVDRMLPKRDGLSVIGALREKGDTTPALILSALGQVDDRIKGLRAGGDDYLPKPYAFAELLARVEVLSRRRGGPSEETSYRVGDLELDRLSHQVRRGATEITLQPREFRLLEYLMKHAGQVVTRTMLLENVWDYHFDPQTNVIDVHISRLRSKIDKGQEHPLLHTIRGAGYMIRDGMR*