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SCNpilot_solid_2_scaffold_322_39

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(46990..48093)

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome c-type biogenesis protein CcmI n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5I8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 367.0
  • Bit_score: 665
  • Evalue 3.40e-188
  • rbh
Cytochrome c-type biogenesis protein CcmI {ECO:0000313|EMBL:EFI51585.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia. similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 367.0
  • Bit_score: 665
  • Evalue 4.70e-188
cycH; cytochrome c-type biogenesis protein CycH; K02200 cytochrome c-type biogenesis protein CcmH similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 367.0
  • Bit_score: 540
  • Evalue 3.90e-151
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1104
ATGTCGCTTTGGTTTATGCTCGCGTTGATGACGGCTGTGGCGGTCTTCGCGGTGCTGTGGCCGCTTGGACGGCAGATCAGGCGCGGCCCATCTGCCAGCGAAACTGTGGTCTATCAAGACCAATTGGCCGAAGTGACGCGCGACGCCGATGCCGGTTTGATCGGTCCGGTGGAAGCGGAAGCCGCGCGGATCGAGATCAGCCGCCGCCTGCTGGCCGCAGCCACAAGCGAGGAGGGCGGCACGCTTGCCGTCAGCAAGAACTGGCGCCGTGTGGTGTCGGTTGTCGCGCTGGCCGGGCTGCCTTTGCTCGCCGCCGGTCTCTATCTCCAGATCGGCTCGCCCTGGCTGCCGGATGCACCTTTTGCCGCGCGCCAGCAGATGAAGCCGCAGGACGCCTCGATCGAGCGTCTGATTGCGCGGGTGCAGGAGATCCTCGAGAAGAATCCCAAGGATGGGCGCGGCTGGAGCGTGCTGGCGCCGGTGCTGCTCAAGCTTGGCCGCGTCAATGAGGCCGTTCCGGCCTTCCGCAACGCGCTTGCCTACAATGACGAGACTGCGGGCCGCCATTCCGATCTCGGGGAAGCGCTCACGGTGGCGGCGAATGGCGTGGTGACGGCGGAGGCCAAGGCTGAATTTGACCGTGCGTTGGCGCTCGATCCGAACGACAGCAAGGCCCGTTATTTCACCGGCGTTGCCGTGGAACAGGACGGACAATCCGCGAAAGCGGCGGAAATCTGGCGCGGCATGCTGGAGAAGGCGTCGGCCGACGCGCCATGGCGGCCGCTGGTTCAGGAGGCCTTGGCGCGGGTGTCAGGCAACCGTCCTCCAGCCCTGTCCGCAGAACAGATGTCGGTGGCGAAGGGGATGGACACGGCCGGCCGCAACGCCATGATCGAGGGTATGGTCGAGCGTCTGGCGGACCGTCTCAAAACGAACAAGGATGACGTCGAAGGATGGCTGCGGCTGGTGCGGGCCTATACGGTTCTCGGCGAAAAAAACAAGGCCAGCACCGCGCGTGACCATGCCCGGCAGGCCCTCAGCGGGAATTCGGAACATTTGCGCCAGCTCAATGATGGCCTCAAGGGACTTGGAATAGACGGGTAA
PROTEIN sequence
Length: 368
MSLWFMLALMTAVAVFAVLWPLGRQIRRGPSASETVVYQDQLAEVTRDADAGLIGPVEAEAARIEISRRLLAAATSEEGGTLAVSKNWRRVVSVVALAGLPLLAAGLYLQIGSPWLPDAPFAARQQMKPQDASIERLIARVQEILEKNPKDGRGWSVLAPVLLKLGRVNEAVPAFRNALAYNDETAGRHSDLGEALTVAANGVVTAEAKAEFDRALALDPNDSKARYFTGVAVEQDGQSAKAAEIWRGMLEKASADAPWRPLVQEALARVSGNRPPALSAEQMSVAKGMDTAGRNAMIEGMVERLADRLKTNKDDVEGWLRLVRAYTVLGEKNKASTARDHARQALSGNSEHLRQLNDGLKGLGIDG*