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SCNpilot_solid_2_scaffold_882_10

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 10149..11513

Top 3 Functional Annotations

Value Algorithm Source
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6C7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 454.0
  • Bit_score: 858
  • Evalue 3.40e-246
  • rbh
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:EFI51874.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 454.0
  • Bit_score: 858
  • Evalue 4.70e-246
general L-amino acid transport system permease AapM; K09971 general L-amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 452.0
  • Bit_score: 785
  • Evalue 6.70e-225
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1365
ATGAACGGGAGCGAGCCCACCTTCGTGCGCAAGACACTGGCACCGGCGCGCAAGGCACCAGTGGTCACCACCGGACTGATTGGCTTTCTCCGCACCAGGCTGTTCAATTCGCCGCTCAATGTCGTGCTCACTTTCGCCAGTGCAGTACTCGCGTGGTTTGTACTGGAGCCGACGATCCGCTTCCTGCTGGTCAATGCAGTCTGGCAGGGAAGCGACCGAACCGCGTGCCTTGCGGATAAAGCTGGCCATCCAGTCGGCGCGTGCTGGCCGTTTATCCAGGCAAAGTTCACTCAGTTGATCTACGGCTTCTATCCCGAAGATCAGCGCTGGCGCGCCAACCTTACATTCGCGCTCGCGGCACTTCTGCTCGCTCCGCTGCTGGTGCCGAAAATTCCCGGCAAGACACTCAACGCCGCGCTGTTCTTTCTCGCGTTTCCATGCCTGGCGTTTTTTCTGCTGCGTGGCGGCGGGTTGGACGGTTTCGCGTTCTACTGGCTGGCCGAACTATTCAGCGTAGCATGGAAGCCCTCACTGATGCGGTTCTGGCTCGACTTTAGCCTGACCACGACCGTGGTGATCGCTGTCGTCATCCTGTTGTGGGGCGGGTGGCCGAACGGACGCCGCGCTGGACTGGTGAGCGCGCTCACGTTCGCAGGGATCGCCGTCGTGATAGTCACGCTGCGGCTTGACCAAGGCGGGCTACCGGTTGTCGATACGCGGCAATGGGGCGGTTTGCTGGTGACGCTGGTGGTGTCGATCACAGGCATCGTCGCCTCTATGCCGATCGGCATTGCGCTGGCATTGGGGCGCACCTCGCGCATTCCGTTGCTGCGTATCTTCTCAGTGGCCTTCATTGAGTTCTGGCGTGGCGTGCCGCTAATTACCGTGTTGTTCTTCGCGACCTACATGTTGCCGCTATTCCTGCCGGGCGACTTCACGATCGATGCGCTGGTGCGCGTGCTGGTCGGCATCGCGCTGTTTGCGGGCGCCTACAATGCCGAAGTGATCCGTGGCGGACTGCTTGCGATTCCGCGCGGACAGCGCGAGGCGGCAAACGCGCTCGGCCTGTCGTACTGGAAGACCACAGGCCTGATTGTACTGCCGCAGGCGTTGCGCCATGTGATCCCAGCTCTGGTCAACAGTTTCATCGCCTTGTTCAAGGACACGACGCTGGTGTTGATCGTGTCGCTGTTCGATCTCCTCGGCCAATTACGCGCGGCATTCGCGGATCCAACCTGGGCAACGCCGACAACGTTGTTCACCGGTTTCGCCTTTACCGGCATCATCTACTGGGTGGGCTGTTTTGCGATGTCGCGCTATTCGCTATTCGTCGAGCGGCGCCTCAATGCGCACCGCCAGACCTGA
PROTEIN sequence
Length: 455
MNGSEPTFVRKTLAPARKAPVVTTGLIGFLRTRLFNSPLNVVLTFASAVLAWFVLEPTIRFLLVNAVWQGSDRTACLADKAGHPVGACWPFIQAKFTQLIYGFYPEDQRWRANLTFALAALLLAPLLVPKIPGKTLNAALFFLAFPCLAFFLLRGGGLDGFAFYWLAELFSVAWKPSLMRFWLDFSLTTTVVIAVVILLWGGWPNGRRAGLVSALTFAGIAVVIVTLRLDQGGLPVVDTRQWGGLLVTLVVSITGIVASMPIGIALALGRTSRIPLLRIFSVAFIEFWRGVPLITVLFFATYMLPLFLPGDFTIDALVRVLVGIALFAGAYNAEVIRGGLLAIPRGQREAANALGLSYWKTTGLIVLPQALRHVIPALVNSFIALFKDTTLVLIVSLFDLLGQLRAAFADPTWATPTTLFTGFAFTGIIYWVGCFAMSRYSLFVERRLNAHRQT*