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SCNpilot_solid_2_scaffold_882

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_882_1
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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270..1481
DNA (1212bp) protein (404aa)
Transposase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F2A7_9RHIZ rbh
Transposase {ECO:0000313|EMBL:CCV10615.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
transposase; K07486 transposase rbh
SCNpilot_solid_2_scaffold_882_2
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1678..2487)
DNA (810bp) protein (270aa)
Aspartyl/Asparaginyl beta-hydroxylase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6B9_9BRAD rbh
Aspartyl/Asparaginyl beta-hydroxylase {ECO:0000313|EMBL:EFI51866.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1
Aspartyl/Asparaginyl beta-hydroxylase
SCNpilot_solid_2_scaffold_882_3
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2826..4493
DNA (1668bp) protein (556aa)
Glycosyl transferase family 39 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6C0_9BRAD rbh
Glycosyl transferase family 39 {ECO:0000313|EMBL:EFI51867.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
glycosyl transferase family protein rbh
SCNpilot_solid_2_scaffold_882_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4642..5298
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLC4_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28330.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
PA-phosphatase-like phosphoesterase
SCNpilot_solid_2_scaffold_882_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5429..6163
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NIQ2_AFIFE rbh
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase {ECO:0000313|EMBL:CEG08125.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afi
family 2 glycosyl transferase rbh
SCNpilot_solid_2_scaffold_882_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6163..6501
DNA (339bp) protein (113aa)
Lipid A biosynthesis domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6C3_9BRAD
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:CEG08124.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scra
lipid A biosynthesis domain-containing protein
SCNpilot_solid_2_scaffold_882_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6505..7737)
DNA (1233bp) protein (411aa)
metC; cystathionine beta-lyase MetC (EC:4.4.1.8); K01760 cystathionine beta-lyase [EC:4.4.1.8] rbh
Cystathionine beta-lyase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6C4_9BRAD rbh
Cystathionine beta-lyase MetC {ECO:0000313|EMBL:CEG08123.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scra
SCNpilot_solid_2_scaffold_882_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7913..8932
DNA (1020bp) protein (340aa)
Cationic amino acid ABC transporter, periplasmic binding protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6C5_9BRAD rbh
General L-amino acid-binding periplasmic protein AapJ {ECO:0000313|EMBL:CEG08122.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source
aapJ1; general L-amino acid-binding periplasmic protein AapJ; K09969 general L-amino acid transport system substrate-binding protein rbh
SCNpilot_solid_2_scaffold_882_9
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8941..10152
DNA (1212bp) protein (404aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6C6_9BRAD rbh
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:EFI51873.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" s
general L-amino acid transport system permease AapQ; K09970 general L-amino acid transport system permease protein rbh
SCNpilot_solid_2_scaffold_882_10
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10149..11513
DNA (1365bp) protein (455aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6C7_9BRAD rbh
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:EFI51874.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" s
general L-amino acid transport system permease AapM; K09971 general L-amino acid transport system permease protein rbh
SCNpilot_solid_2_scaffold_882_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11494..12267
DNA (774bp) protein (258aa)
general L-amino acid transport ATP-binding protein AapP; K09972 general L-amino acid transport system ATP-binding protein [EC:3.6.3.-] rbh
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6C8_9BRAD rbh
Glutamine transport ATP-binding protein GlnQ {ECO:0000313|EMBL:CEG08119.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
SCNpilot_solid_2_scaffold_882_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12405..13442)
DNA (1038bp) protein (346aa)
cysteine synthase A (EC:2.5.1.47); K01738 cysteine synthase A [EC:2.5.1.47] rbh
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NCM0_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28322.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_solid_2_scaffold_882_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14511..15758
DNA (1248bp) protein (416aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6D1_9BRAD rbh
Outer membrane protein OprM {ECO:0000313|EMBL:CEG08116.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratc
NodT family efflux transporter outer membrane lipoprotein rbh
SCNpilot_solid_2_scaffold_882_14
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15748..17019
DNA (1272bp) protein (424aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6D2_9BRAD rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EFI51879.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
multidrug resistance protein MdtA; K07799 putative multidrug efflux transporter MdtA rbh
SCNpilot_solid_2_scaffold_882_15
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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17032..20181
DNA (3150bp) protein (1050aa)
Acriflavin resistance protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6D3_9BRAD rbh
Multidrug transporter MdtB {ECO:0000313|EMBL:CEG08114.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch
mdtB2; multidrug resistance protein MdtB; K07788 RND superfamily, multidrug transport protein MdtB rbh
SCNpilot_solid_2_scaffold_882_16
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20182..23289
DNA (3108bp) protein (1036aa)
Acriflavin resistance protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6D4_9BRAD rbh
Acriflavin resistance protein {ECO:0000313|EMBL:EFI51881.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
mdtC2; multidrug resistance protein MdtC; K07789 RND superfamily, multidrug transport protein MdtC rbh
SCNpilot_solid_2_scaffold_882_17
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23339..24079
DNA (741bp) protein (247aa)
DTW domain containing protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6D5_9BRAD rbh
DTW domain containing protein {ECO:0000313|EMBL:EFI51882.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
DTW domain containing protein rbh
Displaying 17 items

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