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SCNpilot_solid_2_scaffold_882_13

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 14511..15758

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6D1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 415.0
  • Bit_score: 750
  • Evalue 1.20e-213
  • rbh
Outer membrane protein OprM {ECO:0000313|EMBL:CEG08116.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratc similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 415.0
  • Bit_score: 752
  • Evalue 3.30e-214
NodT family efflux transporter outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 419.0
  • Bit_score: 709
  • Evalue 7.20e-202
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGGAGGAAGCCCAGCGTGTCAACCTCGACATCGCGGCTGCGACCGCGCGCATTCTCCAGGCGGACGCACTGGCACGGACGGCGGGCGCCGCTCTCCTGCCGACGCTTGACGCAAACTCATCCGCCACGCGCTCCAAATCGTCATCCGGTTTTCTCAACAACGGCACCTCCGTCGCCCGTGGCACAATCAACACCTATTCAACGTCACTCAGCGCCAGTTACCAGGTTGACTTGTGGGCCAAGAACCGGGACGCGCTGCTTGCGGCCGAGAAAACAGCCGACGCCAACCGTTTCGATCGCGACACGGTGACGCTGACGGCAATGACCAGCGTGGCCAACGCCTATTTCCAGGTACTGGAAGCGCAGGATCGTATCGCAACGGCGCAACGCAACATTGCCAGTGCCCAGCGCATCTACAACGCGATCAAGGCGCGTGTTGATGCAGGCACGAGCTCTGACCTTGATCTCGCTCAACAGGAGAGCCTGCTCGCCAATCAGCGCGCAGCGGTGCCACCACTGCGCCAGACCCTAACGCAAAACATCAACATTCTGGCCACGCTGGTGGCGAGGCCACCCGAGCGTGTTCACATTAGGGGCGGATCGCTCGGCCGCATTTCGGCACCGCGCGTTACGCCGGGATTGCCATCTGAGCTTCTCACCCAGCGACCCGATATCCGCCGTCAGGAGGCACAGCTTGCCTCCGCCACCGCCAATGTTGGCAGCGCACGGGCGCAGTTCTTTCCAAGTATCCAGTTGACCGGGCAGGGAGGCTACCAGAGCTCCGCGCTGTCAGCCCTGTTCATGCCGCAATCCGCCTTCTTCAGTTTGGCTGCGGGCCTGACGCAGCCGATCTTTGACGCGGGCCGCATTCAGGCCAATTTTGACCTGACCAAGGCACAGCAGGACGAGTTGTTGCAGACTTATCGCAAGACGGTGATCTCGGCGTTCTCCGATGTCGATACTGCGCTCGACGCCGTCAAGCAGACCACGGACCGCTTGAGGCTGCAGCGCATCGTCGTGAAATCCTCTCGGCGGGCGTTCGAACTATCGGAAAAACAGCTTCAGGCAGGCACCGCCGATATCGTCACCGTGCTAAACACGCAGCAGACTCTGTTTCAGGCGGAGGACACGTTGCTGCAGGCGCAACTGGCATGGCTGCAATCCTATGTCAGCCTGTTTTCAGCCCTCGGGGGCGGATGGGAACCAAACACAGTGTTGACCACAACGGAGCCGGCGCATGCTCTTTAA
PROTEIN sequence
Length: 416
MEEAQRVNLDIAAATARILQADALARTAGAALLPTLDANSSATRSKSSSGFLNNGTSVARGTINTYSTSLSASYQVDLWAKNRDALLAAEKTADANRFDRDTVTLTAMTSVANAYFQVLEAQDRIATAQRNIASAQRIYNAIKARVDAGTSSDLDLAQQESLLANQRAAVPPLRQTLTQNINILATLVARPPERVHIRGGSLGRISAPRVTPGLPSELLTQRPDIRRQEAQLASATANVGSARAQFFPSIQLTGQGGYQSSALSALFMPQSAFFSLAAGLTQPIFDAGRIQANFDLTKAQQDELLQTYRKTVISAFSDVDTALDAVKQTTDRLRLQRIVVKSSRRAFELSEKQLQAGTADIVTVLNTQQTLFQAEDTLLQAQLAWLQSYVSLFSALGGGWEPNTVLTTTEPAHAL*