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SCNpilot_solid_2_scaffold_1585_10

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 10464..11360

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8Q8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 298.0
  • Bit_score: 589
  • Evalue 1.50e-165
  • rbh
HTH-type transcriptional regulator LeuO {ECO:0000313|EMBL:CEG09059.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 298.0
  • Bit_score: 589
  • Evalue 2.10e-165
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 300.0
  • Bit_score: 261
  • Evalue 3.80e-67

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGAATCTTCGAAACATCGATCTCAACTTGCTGACGGTGTTCGACGCTATCCTGAGCGAGCGCAGCCTCACCCGAGCCTCCGTCAAACTGCACATGACCCAGCCGGCATTGAGCAACGCACTGGCGCGGCTGCGCACCACGCTTGACGACCAACTGTTCATCCGCACCGCGCAGGGAATGATGCCGACAGCGCGCGCCAAACAGCTTGCAGCCCCAATCCGTCAAGCACTCGATCTCATCCAGAACGGACTGCGGAAGCAGGAAGCATTCGAGTTCGAAACGGCAACACGGAAATTCGTGATCGCCATCAGCGACTATGGCGAGGCAGTCATCATGCCGCGCTTCGTCGACTGGCTCGCAACGGTCGCACCTCATATTCAGGTGCAGATCAGGCCGGAGCTTGGCCGCCATATTAAGGAAGAGCTTCGCGACGGCTCGATCGACCTTGCCACCGATTACTTCAAGATTGAGGGAGACGAATTCCGCAACATCCATGTCATGGACGAACATCTCGTCTCAATGGTGCGGCAGGATCATCCGACGATCGGCGATCATCTCAGCATTGAGGATTATCTCTCTATCCCCCATGTCGTCCTAAAGCAGGACAAGCCGATCGTCGATGTCGTTCTCAAAAAATACGGGTTGACGCGCGACATCGCGTTGCAGGTGCCGCACTTTCTCTCGATGCCCTTGATCGTGCAGAAAACCGACTTCATCTGCACACTGCCGAAACGCATGGCGCTGGTTTATGCCGACTTCTTCCGCACCAAGGTGATGAAAACGCCTCTGGAATTTCCCAACATTCCAATCTATTTCATGTGGCACCAGTCGGTCGACGATGACCTCGGCCACCGGTGGCTGCGCAATGCACTCGCCGAACTTTGCCATCGCCTGTAG
PROTEIN sequence
Length: 299
MNLRNIDLNLLTVFDAILSERSLTRASVKLHMTQPALSNALARLRTTLDDQLFIRTAQGMMPTARAKQLAAPIRQALDLIQNGLRKQEAFEFETATRKFVIAISDYGEAVIMPRFVDWLATVAPHIQVQIRPELGRHIKEELRDGSIDLATDYFKIEGDEFRNIHVMDEHLVSMVRQDHPTIGDHLSIEDYLSIPHVVLKQDKPIVDVVLKKYGLTRDIALQVPHFLSMPLIVQKTDFICTLPKRMALVYADFFRTKVMKTPLEFPNIPIYFMWHQSVDDDLGHRWLRNALAELCHRL*