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SCNpilot_solid_2_scaffold_1585

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_1585_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..363)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NIN1_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28921.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein
SCNpilot_solid_2_scaffold_1585_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(351..884)
DNA (534bp) protein (178aa)
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8R6_9BRAD
Bicarbonate transport ATP-binding protein CmpD {ECO:0000313|EMBL:CEG09051.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipi
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein
SCNpilot_solid_2_scaffold_1585_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1073..1843)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NNP5_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29150.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
enoyl-CoA hydratase
SCNpilot_solid_2_scaffold_1585_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1896..4028)
DNA (2133bp) protein (711aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJ81_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29151.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
acyl-CoA synthetase (NDP forming); K09181 hypothetical protein rbh
SCNpilot_solid_2_scaffold_1585_5
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4062..5285)
DNA (1224bp) protein (408aa)
glutaryl-CoA dehydrogenase; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7]
Acyl-CoA dehydrogenase domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8R3_9BRAD rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:EFI50551.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1
SCNpilot_solid_2_scaffold_1585_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5330..6364)
DNA (1035bp) protein (345aa)
Putative periplasmic subtsrate-binding protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8R2_9BRAD rbh
ABC transporter, substrate-binding protein, aliphatic sulfonates family {ECO:0000313|EMBL:CEG09055.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae
periplasmic subtsrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein
SCNpilot_solid_2_scaffold_1585_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6405..7415)
DNA (1011bp) protein (337aa)
Putative ABC transporter periplasmic substrate-binding protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8R1_9BRAD rbh
Alkanesulfonate transporter substrate-binding subunit {ECO:0000313|EMBL:CEG09056.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source
ABC transporter periplasmic substrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein
SCNpilot_solid_2_scaffold_1585_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7495..8697)
DNA (1203bp) protein (401aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8R0_9BRAD rbh
3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase {ECO:0000313|EMBL:CEG09057.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source
SCNpilot_solid_2_scaffold_1585_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8724..10250)
DNA (1527bp) protein (509aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJ87_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29156.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_solid_2_scaffold_1585_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10464..11360
DNA (897bp) protein (299aa)
Transcriptional regulator, LysR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8Q8_9BRAD rbh
HTH-type transcriptional regulator LeuO {ECO:0000313|EMBL:CEG09059.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis
LysR family transcriptional regulator
SCNpilot_solid_2_scaffold_1585_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12321..12725
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8Q7_9BRAD
Inner membrane protein YidH {ECO:0000313|EMBL:CEG09060.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratc
hypothetical protein; K00389 putative membrane protein
SCNpilot_solid_2_scaffold_1585_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12740..13060
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8Q6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG09061.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_1585_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13129..13962
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8Q5_9BRAD rbh
Phosphonate utilization associated putative membrane protein {ECO:0000313|EMBL:CEG09062.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;"
hypothetical protein rbh
Displaying 13 items

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