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SCNpilot_BF_INOC_scaffold_1969

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1969_1
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(338..781)
DNA (444bp) protein (148aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=C7X9E2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU50869.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13
SCNpilot_BF_INOC_scaffold_1969_2
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1431..2033)
DNA (603bp) protein (201aa)
MTH538 TIR-like domain (DUF1863) n=3 Tax=Bacteroidales RepID=D6D3A2_9BACE
MTH538 TIR-like domain (DUF1863).
MTH538 TIR-like domain (DUF1863) {ECO:0000313|EMBL:CBK68904.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolv
SCNpilot_BF_INOC_scaffold_1969_3
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2037..3992)
DNA (1956bp) protein (652aa)
TIR domain n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6D3A3_9BACE
TIR domain.
TIR domain {ECO:0000313|EMBL:CBK68905.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
SCNpilot_BF_INOC_scaffold_1969_4
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4009..4554)
DNA (546bp) protein (182aa)
MTH538 TIR-like domain (DUF1863) n=3 Tax=Bacteroidales RepID=D6D3A1_9BACE
MTH538 TIR-like domain (DUF1863).
Uncharacterized protein {ECO:0000313|EMBL:EEU50910.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13
SCNpilot_BF_INOC_scaffold_1969_5
Formosa sp. AK20, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4996..5319)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Formosa sp. AK20 RepID=M7N7G3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EMQ94378.1}; TaxID=1137281 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa sp. AK20.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1969_6
Myroides odoratus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5332..5895)
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Myroides RepID=K1IC51_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ43939.1}; TaxID=929704 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratu
MTH538 TIR-like domain (DUF1863).
SCNpilot_BF_INOC_scaffold_1969_7
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6323..6610
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Bacteroides cellulosilyticus CL02T12C19 RepID=I8WIG1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY37627.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL
hypothetical protein
SCNpilot_BF_INOC_scaffold_1969_8
GWD2_Clostridiales_32_59_curated, Clostridiales, Bacteria

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6624..7163
DNA (540bp) protein (180aa)
id=1894715 bin=GWD2_Clostridiales_32_59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
id=1894715 Tax=GWD2_Clostridiales_32_59_curated
SCNpilot_BF_INOC_scaffold_1969_9
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7636..10905
DNA (3270bp) protein (1090aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K6ALK1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB50798.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HG
outer membrane assembly protein
SCNpilot_BF_INOC_scaffold_1969_10
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10909..12018)
DNA (1110bp) protein (370aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IYH6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01611.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BA
ABC transporter permease
SCNpilot_BF_INOC_scaffold_1969_11
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12020..13126)
DNA (1107bp) protein (369aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IYH5_9PORP
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei AT
multidrug ABC transporter permease
SCNpilot_BF_INOC_scaffold_1969_12
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13128..13871)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IH32_9BACE
ABC transporter {ECO:0000313|EMBL:GAK37663.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 =
ABC transporter ATP-binding protein
SCNpilot_BF_INOC_scaffold_1969_13
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13868..14782)
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WYS4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04097.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22
ABC transporter
SCNpilot_BF_INOC_scaffold_1969_14
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14782..15693)
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IYG9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01604.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BA
ABC transporter lipoprotein
SCNpilot_BF_INOC_scaffold_1969_15
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15708..16970)
DNA (1263bp) protein (421aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IYG8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01603.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BA
transporter
SCNpilot_BF_INOC_scaffold_1969_16
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16996..17622)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Y1D9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06872.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnson
transcriptional regulator
SCNpilot_BF_INOC_scaffold_1969_17
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17711..18595)
DNA (885bp) protein (295aa)
Transcriptional regulator, AraC family n=1 Tax=Bacteroides pyogenes F0041 RepID=U2DVZ9_9BACE
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERI85822.1}; TaxID=1321819 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyo
AraC family transcriptional regulator
SCNpilot_BF_INOC_scaffold_1969_18
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18827..19573)
DNA (747bp) protein (249aa)
Glycosyl hydrolase, family 43 n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JJW2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKB48286.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordon
putative xylosidase/arabinosidase
SCNpilot_BF_INOC_scaffold_1969_19
unknown

Not on your lists

comp(19594..19779)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1969_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19872..21077)
DNA (1206bp) protein (402aa)
L-serine ammonia-lyase n=3 Tax=Parabacteroides RepID=K5YF23_9PORP
L-serine dehydratase
L-serine dehydratase, iron-sulfur-dependent, single chain form {ECO:0000313|EMBL:ABR43099.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabactero
SCNpilot_BF_INOC_scaffold_1969_21
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21096..22232)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YVJ7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEY84559.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
transmembrane protein
SCNpilot_BF_INOC_scaffold_1969_22
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22277..23788
DNA (1512bp) protein (504aa)
Cobyric acid synthase n=4 Tax=Parabacteroides RepID=COBQ_PARD8
cobyric acid synthase
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides;
SCNpilot_BF_INOC_scaffold_1969_23
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23873..24361)
DNA (489bp) protein (163aa)
Transcription termination/antitermination factor NusG n=3 Tax=Parabacteroides RepID=B7B9G7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78463.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source=
transcription termination/antitermination factor NusG
SCNpilot_BF_INOC_scaffold_1969_24
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24486..25808
DNA (1323bp) protein (441aa)
Putative NADH-dependent dyhydrogenase n=1 Tax=Parabacteroides sp. CAG:409 RepID=R7J6E4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB48300.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordon
NADH-dependent dyhydrogenase
SCNpilot_BF_INOC_scaffold_1969_25
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26098..26559)
DNA (462bp) protein (154aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
4-hydroxy-tetrahydrodipicolinate synthase n=3 Tax=Parabacteroides RepID=K5ZIH2_9PORP
dapA2; dihydrodipicolinate synthase
Displaying 25 items

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