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scnpilot_p_inoc_scaffold_77

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Displaying items 1-30 of 569 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_77_1
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(837..1382)
DNA (546bp) protein (182aa)
Uncharacterized protein id=2592436 bin=GWF1_Rhodobacteraceae_65_7 species=Nitratireductor indicus genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
beta-Ig-H3/fasciclin Tax=GWF1_Rhodobacteraceae_65_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_77_2
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1478..2107)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EGG1_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ESW60211.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. C
hypothetical protein
scnpilot_p_inoc_scaffold_77_3
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2104..2646)
DNA (543bp) protein (181aa)
RNA polymerase sigma factor n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EJ89_9RHOB
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWF1_Rhodobacteraceae_65_7_curated
RNA polymerase sigma-70 factor
scnpilot_p_inoc_scaffold_77_4
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2692..4722)
DNA (2031bp) protein (677aa)
Ferredoxin id=2592369 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
ferredoxin Tax=GWF1_Rhodobacteraceae_65_7_curated
ferredoxin
scnpilot_p_inoc_scaffold_77_5
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4738..5163)
DNA (426bp) protein (142aa)
Uncharacterized protein id=2592366 bin=GWF1_Rhodobacteraceae_65_7 species=Oceaniovalibus guishaninsula genus=Oceaniovalibus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Cupin 2 barrel domain-containing protein Tax=GWF1_Rhodobacteraceae_65_7_curated
dddW; DMSP lyase
scnpilot_p_inoc_scaffold_77_6
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5260..7707)
DNA (2448bp) protein (816aa)
Heme peroxidase (Fragment) n=1 Tax=uncultured bacterium RepID=K2BD62_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:KAJ56819.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium m
hemolysin-type calcium-binding protein
scnpilot_p_inoc_scaffold_77_7
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7850..8830)
DNA (981bp) protein (327aa)
methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase (EC:2.1.1.13); K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacter
methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase (EC:2.1.1.13)
Methionine synthase id=2990521 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
scnpilot_p_inoc_scaffold_77_8
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8840..9763)
DNA (924bp) protein (308aa)
putative 5,10-methylenetetrahydrofolate reductase; K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20] Tax=GWF1_Rhodobacteraceae_65_7_curated
putative 5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
5,10-methylenetetrahydrofolate reductase, putative id=2990522 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
scnpilot_p_inoc_scaffold_77_9
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9795..10091)
DNA (297bp) protein (99aa)
Putative uncharacterized protein id=2990523 bin=GWF1_Rhodobacteraceae_65_7 species=Dinoroseobacter shibae genus=Dinoroseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein Tax=GWF1_Rhodobacteraceae_65_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_77_10
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10319..11458
DNA (1140bp) protein (380aa)
Ppx/GppA phosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] Tax=GWF1_Rhodobacteraceae_65_7_curated
Ppx/GppA phosphatase id=2990524 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
Ppx/GppA phosphatase rbh
scnpilot_p_inoc_scaffold_77_11
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11455..12201
DNA (747bp) protein (249aa)
ribosomal RNA methyltransferase RrmJ/FtsJ; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] Tax=GWF1_Rhodobacteraceae_65_7_curated
ftsJ; 23S rRNA Um-2552 2'-O-methyltransferase (EC:2.1.1.166) rbh
Ribosomal RNA large subunit methyltransferase E id=2990525 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
scnpilot_p_inoc_scaffold_77_12
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12251..12820)
DNA (570bp) protein (190aa)
Putative uncharacterized protein id=2990526 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
hypothetical protein Tax=GWF1_Rhodobacteraceae_65_7_curated
hypothetical protein rbh
scnpilot_p_inoc_scaffold_77_13
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13146..14741
DNA (1596bp) protein (532aa)
Peptidoglycan-binding domain 1 protein id=2990527 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
hypothetical protein Tax=GWF1_Rhodobacteraceae_65_7_curated
peptidoglycan-binding domain 1 protein rbh
scnpilot_p_inoc_scaffold_77_14
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14783..15862
DNA (1080bp) protein (360aa)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] Tax=GWF1_Rhodobacteraceae_65_7_curated
UDP-3-O-acylglucosamine N-acyltransferase id=2990528 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sphaeroides genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
scnpilot_p_inoc_scaffold_77_15
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15900..16166
DNA (267bp) protein (89aa)
phosphopantetheine-binding; K14661 nodulation protein F [EC:2.3.1.-] Tax=GWF1_Rhodobacteraceae_65_7_curated
Phosphopantetheine-binding protein id=2990586 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
phosphopantetheine-binding
scnpilot_p_inoc_scaffold_77_16
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16163..17374
DNA (1212bp) protein (404aa)
beta-ketoacyl synthase; K14660 nodulation protein E [EC:2.3.1.-] Tax=GWF1_Rhodobacteraceae_65_7_curated
3-oxoacyl-[acyl-carrier-protein] synthase II id=2990592 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
beta-ketoacyl synthase
scnpilot_p_inoc_scaffold_77_17
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17424..18089)
DNA (666bp) protein (222aa)
Invasion associated locus B family protein id=2990599 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
invasion associated locus B family protein Tax=GWF1_Rhodobacteraceae_65_7_curated
invasion associated locus B family protein
scnpilot_p_inoc_scaffold_77_18
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18596..20170
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RZ72_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EEW26029.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW
hypothetical protein
scnpilot_p_inoc_scaffold_77_19
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20265..21647
DNA (1383bp) protein (461aa)
Hemolysin-type calcium-binding region id=2990610 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
hypothetical protein Tax=GWF1_Rhodobacteraceae_65_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_77_20
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21681..23006)
DNA (1326bp) protein (442aa)
Putative uncharacterized protein id=2990615 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
hypothetical protein Tax=GWF1_Rhodobacteraceae_65_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_77_21
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23003..23953)
DNA (951bp) protein (317aa)
Phage integrase family protein id=2990619 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
phage integrase family protein; K04763 integrase/recombinase XerD Tax=GWF1_Rhodobacteraceae_65_7_curated
phage integrase family protein rbh
scnpilot_p_inoc_scaffold_77_22
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23950..25497)
DNA (1548bp) protein (516aa)
Putative uncharacterized protein id=2990623 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
hypothetical protein Tax=GWF1_Rhodobacteraceae_65_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_77_23
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25544..25678)
DNA (135bp) protein (45aa)
Uncharacterized protein {ECO:0000313|EMBL:EEW26024.1}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source=
scnpilot_p_inoc_scaffold_77_24
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25827..26399
DNA (573bp) protein (191aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1408890 species="Bacteria; Proteobacteria; Alphap
shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EKW6_9RHOB
scnpilot_p_inoc_scaffold_77_25
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26396..27517
DNA (1122bp) protein (374aa)
aroB; 3-dehydroquinate synthase; K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=GWF1_Rhodobacteraceae_65_7_curated
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase id=2990640 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
scnpilot_p_inoc_scaffold_77_26
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27963..29141
DNA (1179bp) protein (393aa)
HI0933 family protein id=2892405 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
hypothetical protein; K07007 Tax=GWF1_Rhodobacteraceae_65_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_77_27
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29260..29955
DNA (696bp) protein (232aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=GWF1_Rhodobacteraceae_65_7_curated
Ribulose-phosphate 3-epimerase id=2892400 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
Ribulose-5-phosphate 3-epimerase
scnpilot_p_inoc_scaffold_77_28
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30035..31798
DNA (1764bp) protein (588aa)
sulfate:proton symporter n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B2F139 rbh
Sulfate transporter permease
Sulfate transporter, permease protein, putative {ECO:0000313|EMBL:ADZ72676.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LM
scnpilot_p_inoc_scaffold_77_29
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31799..32983)
DNA (1185bp) protein (395aa)
FAD dependent oxidoreductase n=1 Tax=Rhodobacter sp. SW2 RepID=C8RZ54_9RHOB rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:EEW26011.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter s
Glycine/D-amino acid oxidase (deaminating)
scnpilot_p_inoc_scaffold_77_30
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33188..33976
DNA (789bp) protein (263aa)
Transcriptional regulator, LuxR family id=3042142 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
LuxR family transcriptional regulator Tax=GWF1_Rhodobacteraceae_65_7_curated
LuxR family autoinducer-binding transcriptional regulator
Displaying items 1-30 of 569 in total

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