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scnpilot_p_inoc_scaffold_1652

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1652_1
unknown

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1..72
DNA (72bp) protein (24aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1652_2

Not on your lists

69..440
DNA (372bp) protein (124aa)
Predicted protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) RepID=A4RUL0_OSTLU
Uncharacterized protein {ECO:0000313|EMBL:KKN69717.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
tolA; cell envelope integrity inner membrane protein TolA
scnpilot_p_inoc_scaffold_1652_3

Not on your lists

443..1021
DNA (579bp) protein (193aa)
Uncharacterized protein n=5 Tax=root RepID=I3UM02_9VIRU
Putative uncharacterized protein {ECO:0000313|EMBL:AFA44850.1}; TaxID=1131316 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA phages.;" source="Rhodobacter phage RcapNL.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1652_4
Thioclava dalianensis, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1021..1344
DNA (324bp) protein (108aa)
Phage head-tail adaptor, putative, SPP1 family n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) RepID=Q3J4R9_RHOS4
Phage head-tail adapter protein {ECO:0000313|EMBL:KEP68414.1}; TaxID=1185766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava d
phage head-tail adaptor, putative, SPP1 family
scnpilot_p_inoc_scaffold_1652_5
Rhodobacter capsulatus, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1344..1904
DNA (561bp) protein (187aa)
Uncharacterized protein n=4 Tax=Rhodobacter capsulatus RepID=D5AUU5_RHOCB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETE53646.1}; TaxID=1415161 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter capsu
scnpilot_p_inoc_scaffold_1652_6
Ruegeria mobilis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1908..2297
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Ruegeria mobilis F1926 RepID=R0F9B6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KJZ24078.1}; TaxID=379347 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria mobilis.;"
Protein of unknown function (DUF3168)
scnpilot_p_inoc_scaffold_1652_7
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2297..2716
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI0003802B24
outer capsid protein
Outer capsid protein {ECO:0000313|EMBL:AGT07904.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilu
scnpilot_p_inoc_scaffold_1652_8
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2719..3042
DNA (324bp) protein (108aa)
Uncharacterized protein {ECO:0000313|EMBL:BAQ68781.1}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sulfidoph
scnpilot_p_inoc_scaffold_1652_9
Loktanella cinnabarina, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3069..3353
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00036C9836
Uncharacterized protein {ECO:0000313|EMBL:GAD55493.1}; TaxID=1337093 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella cinnaba
scnpilot_p_inoc_scaffold_1652_10
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3800..5968
DNA (2169bp) protein (723aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) RepID=A3PHD1_RHOS1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABN75747.1}; TaxID=349101 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaer
scnpilot_p_inoc_scaffold_1652_11

Not on your lists

5965..6837
DNA (873bp) protein (291aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN69706.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_p_inoc_scaffold_1652_12
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6831..7409
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Loktanella cinnabarina LL-001 RepID=U2YKJ7_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KFI27783.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter ma
scnpilot_p_inoc_scaffold_1652_13
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7406..7783
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IQM0_METNO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL60532.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
scnpilot_p_inoc_scaffold_1652_14
Loktanella cinnabarina, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7768..10560
DNA (2793bp) protein (931aa)
Uncharacterized protein n=1 Tax=Loktanella cinnabarina LL-001 RepID=U3AL76_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD55498.1}; TaxID=1337093 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella cinnaba
host specificity protein J
scnpilot_p_inoc_scaffold_1652_15
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

10580..12658
DNA (2079bp) protein (693aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_48F7 RepID=B3SZU7_9ZZZZ
hypothetical protein Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1652_16
unknown

Not on your lists

12671..13468
DNA (798bp) protein (266aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1652_17
EBPR podovirus 2, Caudovirales, Viruses

Not on your lists

13511..13786
DNA (276bp) protein (92aa)
Putative uncharacterized protein gp33 n=1 Tax=EBPR podovirus 2 RepID=F8TUT2_9CAUD
Putative uncharacterized protein gp33 {ECO:0000313|EMBL:AEI70928.1}; TaxID=1048516 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Podoviridae.;" source="EBPR podovirus 2.;"
scnpilot_p_inoc_scaffold_1652_18
EBPR siphovirus 4, Caudovirales, Viruses

Not on your lists

13827..14444
DNA (618bp) protein (206aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Putative uncharacterized protein gp7 id=2483918 bin=GWF1_Rhodobacteraceae_65_7 species=EBPR siphovirus 4 genus=unknown taxon_order=Caudovirales taxon_class=unknown phylum=unknown tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Putative uncharacterized protein gp7 {ECO:0000313|EMBL:AEI71112.1}; TaxID=1048523 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="EBPR siphovirus 4.;"
scnpilot_p_inoc_scaffold_1652_19
Sphingobium chinhatense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14446..14679
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Sphingobium chinhatense RepID=UPI0003738AF3
Uncharacterized protein {ECO:0000313|EMBL:EPR09802.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chi
scnpilot_p_inoc_scaffold_1652_20
EBPR siphovirus 4, Caudovirales, Viruses

Not on your lists

14682..15017
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00038003B3
Putative uncharacterized protein gp8 {ECO:0000313|EMBL:AEI71113.1}; TaxID=1048523 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="EBPR siphovirus 4.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1652_21
unknown

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comp(15045..15389)
DNA (345bp) protein (115aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1652_22
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15389..15547)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FSX0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EDM70822.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. Az
scnpilot_p_inoc_scaffold_1652_23
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15747..16232
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI000380DDBF
Wenxma_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ71103.1}; TaxID=1123501 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenx
hypothetical protein
scnpilot_p_inoc_scaffold_1652_24
unknown

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comp(16283..16423)
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1652_25
Agrobacterium sp. ATCC 31749, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16468..16980)
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5JBV0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EGL64426.1}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" so
scnpilot_p_inoc_scaffold_1652_26
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17088..17711)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y978_PARAH
Uncharacterized protein {ECO:0000313|EMBL:KFI25684.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter ma
hypothetical protein
scnpilot_p_inoc_scaffold_1652_27
Haematobacter missouriensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17713..17976)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XL30_PARAH
Uncharacterized protein {ECO:0000313|EMBL:KFI25512.1}; TaxID=366616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter mi
hypothetical protein
Displaying 27 items

View Taxonomy