ggKbase home page

scnpilot_cont_500_p_scaffold_298

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_298_1
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..214)
DNA (213bp) protein (71aa)
RHS repeat-associated core domain protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AWY2_DELSC
RHS repeat-associated core domain-containing protein
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AEF89285.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia
scnpilot_cont_500_p_scaffold_298_2
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(214..759)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0003072618 rbh
Pilus assembly protein TadE {ECO:0000313|EMBL:KEH14545.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis
TadE family protein
scnpilot_cont_500_p_scaffold_298_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(774..1031)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0003072618
Uncharacterized protein {ECO:0000313|EMBL:EPD39655.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
TadE family protein
scnpilot_cont_500_p_scaffold_298_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1091..2254)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002D30DAB rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD39654.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein rbh
scnpilot_cont_500_p_scaffold_298_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2412..2798)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0003072C2B
Uncharacterized protein {ECO:0000313|EMBL:EPD39653.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
scnpilot_cont_500_p_scaffold_298_6
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2798..3730)
DNA (933bp) protein (311aa)
secretion system protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00030F1FBD rbh
Secretion system protein {ECO:0000313|EMBL:KEH14542.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
type II secretion system protein
scnpilot_cont_500_p_scaffold_298_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3741..4610)
DNA (870bp) protein (290aa)
Tight adherence protein B n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X420_DELAC rbh
Tight adherence protein B {ECO:0000313|EMBL:EPD46476.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCU
type II secretion system protein rbh
scnpilot_cont_500_p_scaffold_298_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4607..6364)
DNA (1758bp) protein (586aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XMJ2_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD46477.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
type II secretion system protein E
scnpilot_cont_500_p_scaffold_298_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6361..8604)
DNA (2244bp) protein (748aa)
Pilus assembly protein CpaC n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X355_DELAC rbh
Pilus assembly protein CpaC {ECO:0000313|EMBL:EPD46478.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans C
type II and III secretion system protein rbh
scnpilot_cont_500_p_scaffold_298_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8641..9657)
DNA (1017bp) protein (339aa)
Flp pilus assembly protein CpaB n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WIU8_DELAC rbh
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:EPD39648.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovora
SAF domain-containing protein rbh
scnpilot_cont_500_p_scaffold_298_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9668..9847)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X3J5_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD39647.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
scnpilot_cont_500_p_scaffold_298_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9844..10593)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WK01_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD39646.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
scnpilot_cont_500_p_scaffold_298_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10590..11402)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XMJ8_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD46482.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein rbh
scnpilot_cont_500_p_scaffold_298_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11399..12874)
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XJ35_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD39644.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein rbh
scnpilot_cont_500_p_scaffold_298_15
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12887..13153)
DNA (267bp) protein (89aa)
Uncharacterized protein n=3 Tax=cellular organisms RepID=S2WIU2_DELAC
Membrane protein {ECO:0000313|EMBL:KEH14537.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_298_16
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13905..14753)
DNA (849bp) protein (283aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00037296}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00001352};; 7-cyan
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WJZ9_DELAC rbh
queF; 7-cyano-7-deazaguanine reductase
scnpilot_cont_500_p_scaffold_298_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14910..15794)
DNA (885bp) protein (295aa)
procollagen-proline dioxygenase (EC:1.14.11.2)
Prolyl 4-hydroxylase n=2 Tax=Bacteria RepID=S2WNA5_DELAC rbh
Prolyl 4-hydroxylase {ECO:0000313|EMBL:EPD39640.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274
scnpilot_cont_500_p_scaffold_298_18
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15873..16658)
DNA (786bp) protein (262aa)
UPF0246 protein HMPREF9701_03076 n=2 Tax=Delftia acidovorans RepID=S2XJ27_DELAC rbh
UPF0246 protein GY15_05150 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhaten
hypothetical protein
scnpilot_cont_500_p_scaffold_298_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16766..19888)
DNA (3123bp) protein (1041aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=883100 species="Bacteria; Proteobacteria; Bet
Ribonuclease E n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X365_DELAC rbh
ribonuclease, Rne/Rng family
scnpilot_cont_500_p_scaffold_298_20
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20424..21485
DNA (1062bp) protein (354aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
Pseudouridine synthase n=2 Tax=Delftia acidovorans RepID=S2X3I2_DELAC rbh
RluA family pseudouridine synthase
scnpilot_cont_500_p_scaffold_298_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21510..22196
DNA (687bp) protein (229aa)
Phosphoglycolate phosphatase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WJZ4_DELAC rbh
Phosphoglycolate phosphatase {ECO:0000313|EMBL:EPD39636.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans
HAD family hydrolase
scnpilot_cont_500_p_scaffold_298_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22246..22614
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X439_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD46491.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
Rieske (2Fe-2S) domain-containing protein
scnpilot_cont_500_p_scaffold_298_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22616..23662
DNA (1047bp) protein (349aa)
Signal peptide peptidase SppA, 36K type n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XJ21_DELAC rbh
Signal peptide peptidase SppA, 36K type {ECO:0000313|EMBL:EPD39634.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia a
peptidase S49
scnpilot_cont_500_p_scaffold_298_24
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23744..24535)
DNA (792bp) protein (264aa)
uroporphyrin-III methyltransferase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002F795CC rbh
Uroporphyrin-III methyltransferase {ECO:0000313|EMBL:KEH14527.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruh
uroporphyrin-III C/tetrapyrrole methyltransferase
scnpilot_cont_500_p_scaffold_298_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24532..25152)
DNA (621bp) protein (207aa)
Maf-like protein HMPREF9701_03069 n=2 Tax=Delftia acidovorans RepID=S2X3H6_DELAC rbh
Maf-like protein HMPREF9701_03069 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia aci
maf protein
scnpilot_cont_500_p_scaffold_298_26
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25178..25735
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WJZ0_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:KEH14525.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_298_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


25873..26055
DNA (183bp) protein (61aa)
50S ribosomal protein L32 n=4 Tax=Delftia RepID=RL32_DELAS
50S ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans
scnpilot_cont_500_p_scaffold_298_28
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26193..27209
DNA (1017bp) protein (339aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
Phosphate acyltransferase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XML0_DELAC rbh
putative glycerol-3-phosphate acyltransferase PlsX
scnpilot_cont_500_p_scaffold_298_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27215..28192
DNA (978bp) protein (326aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=2 Tax=Delftia acidovorans RepID=S2WIS3_DELAC rbh
scnpilot_cont_500_p_scaffold_298_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28223..29194
DNA (972bp) protein (324aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkhol
malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X3H0_DELAC rbh
Displaying items 1-30 of 52 in total

View Taxonomy