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scnpilot_cont_500_p_scaffold_549

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_549_1
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

566..886
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTC4_DELAS
Uncharacterized protein {ECO:0000313|EMBL:KEH07325.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_549_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

912..1226
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WSB2_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD35627.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
ArsR family transcriptional regulator
scnpilot_cont_500_p_scaffold_549_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1223..1579
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2W7G8_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD35628.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
scnpilot_cont_500_p_scaffold_549_4
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1658..2263
DNA (606bp) protein (202aa)
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-R
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6APL4_DELSC rbh
scnpilot_cont_500_p_scaffold_549_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2623..3597)
DNA (975bp) protein (325aa)
endonuclease n=1 Tax=Chryseobacterium taeanense RepID=UPI0002E47070 rbh
Endonuclease G {ECO:0000313|EMBL:EPD35630.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
DNA/RNA non-specific endonuclease
scnpilot_cont_500_p_scaffold_549_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3738..4949)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B PF3_DELAC">RepID=S2WPF3_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD34582.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
major facilitator transporter
scnpilot_cont_500_p_scaffold_549_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4961..5308)
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Delftia RepID=A9BTD0_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFJ10054.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseud
scnpilot_cont_500_p_scaffold_549_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5405..6073)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2W7H3_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD35633.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
scnpilot_cont_500_p_scaffold_549_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6247..7581)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X6Q1_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD35634.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
two component, sigma54 specific, Fis family transcriptional regulator
scnpilot_cont_500_p_scaffold_549_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7566..8918)
DNA (1353bp) protein (451aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Del
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WBR8_DELAC rbh
histidine kinase
scnpilot_cont_500_p_scaffold_549_11
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9287..9841
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B PF7_DELAC">RepID=S2WPF7_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:KEH07317.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_549_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9857..11299
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WSC2_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD35637.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
diguanylate phosphodiesterase
scnpilot_cont_500_p_scaffold_549_13
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11354..12610)
DNA (1257bp) protein (419aa)
Glycosyl transferase group 1 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTD6_DELAS rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:EZP50478.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.
glycosyl transferase group 1 protein
scnpilot_cont_500_p_scaffold_549_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12663..14057)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2W8Q8_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD34590.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
sigma-54 dependent trancsriptional regulator
scnpilot_cont_500_p_scaffold_549_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14105..16357)
DNA (2253bp) protein (751aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WBS5_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD35640.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
scnpilot_cont_500_p_scaffold_549_16
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16375..17037)
DNA (663bp) protein (221aa)
pilus assembly protein TadE n=1 Tax=Chryseobacterium taeanense RepID=UPI0002D50B53 rbh
TadE family protein {ECO:0000313|EMBL:EZP50481.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
TadE family protein
scnpilot_cont_500_p_scaffold_549_17
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17034..17549)
DNA (516bp) protein (172aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2W4J0_DELAC rbh
Pilus assembly protein TadE {ECO:0000313|EMBL:KEH11600.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis
TadE family protein
scnpilot_cont_500_p_scaffold_549_18
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17582..18031)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2W7I1_DELAC
Uncharacterized protein {ECO:0000313|EMBL:KEH07313.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_549_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18042..19016)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X6R2_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD35644.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
scnpilot_cont_500_p_scaffold_549_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19019..20023)
DNA (1005bp) protein (335aa)
Tight adherence protein C n=2 Tax=Delftia acidovorans RepID=S2WBS9_DELAC rbh
Tight adherence protein C {ECO:0000313|EMBL:EPD35645.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCU
type II secretion system protein
scnpilot_cont_500_p_scaffold_549_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20084..21046)
DNA (963bp) protein (321aa)
Tight adherence protein B n=2 Tax=Delftia acidovorans RepID=S2W7H0_DELAC rbh
Tight adherence protein B {ECO:0000313|EMBL:EPD34135.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCU
type II secretion system F domain-containing protein
scnpilot_cont_500_p_scaffold_549_22
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21043..22365)
DNA (1323bp) protein (441aa)
Pilus assembly protein CpaF n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W4K2_DELAC rbh
Pilus assembly protein CpaF {ECO:0000313|EMBL:KEH07308.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis
type II secretion system protein E
scnpilot_cont_500_p_scaffold_549_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22373..23914)
DNA (1542bp) protein (514aa)
Pilus assembly protein CpaE n=2 Tax=Delftia acidovorans RepID=S2W7I5_DELAC rbh
Pilus assembly protein CpaE {ECO:0000313|EMBL:EPD34137.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans C
Flp pilus assembly protein ATPase CpaE-like protein
scnpilot_cont_500_p_scaffold_549_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23919..25424)
DNA (1506bp) protein (502aa)
type II and III secretion system protein n=1 Tax=Chryseobacterium taeanense RepID=UPI000315EF06 rbh
Pilus assembly protein CpaC {ECO:0000313|EMBL:EPD35649.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans C
type II and III secretion system protein
scnpilot_cont_500_p_scaffold_549_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25450..26496)
DNA (1047bp) protein (349aa)
Flp pilus assembly protein CpaB n=2 Tax=Delftia acidovorans RepID=S2WBT3_DELAC rbh
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:EPD34139.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovora
Flp pilus assembly protein CpaB
scnpilot_cont_500_p_scaffold_549_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26689..27273)
DNA (585bp) protein (195aa)
Prepilin peptidase CpaA n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2W8Y0_DELAC rbh
Prepilin peptidase CpaA {ECO:0000313|EMBL:EPD35651.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
peptidase A24A prepilin type IV
scnpilot_cont_500_p_scaffold_549_27
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27276..27452)
DNA (177bp) protein (59aa)
Pilus assembly protein Flp/PilA n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WSD9_DELAC
Pilus assembly protein {ECO:0000313|EMBL:KEH11608.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
Flp/Fap pilin component
scnpilot_cont_500_p_scaffold_549_28
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27562..27738)
DNA (177bp) protein (59aa)
Pilus assembly protein Flp/PilA n=2 Tax=Delftia acidovorans RepID=S2W7J0_DELAC
Pilus assembly protein {ECO:0000313|EMBL:KEH11609.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
Flp/Fap pilin component
scnpilot_cont_500_p_scaffold_549_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27837..29570)
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W311_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD34143.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
outer membrane efflux protein
scnpilot_cont_500_p_scaffold_549_30
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29570..30946)
DNA (1377bp) protein (459aa)
Type I secretion membrane fusion protein, HlyD family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ANP8_DELSC rbh
HlyD family type I secretion membrane fusion protein
Type I secretion membrane fusion protein, HlyD family {ECO:0000313|EMBL:AEF91588.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
Displaying items 1-30 of 34 in total

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