ggKbase home page

scnpilot_p_inoc_scaffold_489_4

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(4456..4851)

Top 3 Functional Annotations

Value Algorithm Source
Endoribonuclease L-PSP n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46U09_CUPPJ similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 127.0
  • Bit_score: 214
  • Evalue 7.40e-53
Endoribonuclease L-PSP {ECO:0000313|EMBL:AKC86989.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthom similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 129.0
  • Bit_score: 263
  • Evalue 1.90e-67
endoribonuclease L-PSP similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 127.0
  • Bit_score: 214
  • Evalue 2.10e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGAGCGACATCAAGCGTTACGGCGCCGAGGGCGGGGTCGGCCAGGGCCGCCAGCACATGCCGTTTTCGCGCGCGGTCGAGGCCGACGGCTGGCTGTACGTTTCCGGCCAGGTACCGATGCGCGACGGCGAACTGGTCGGCGGCACCGTGACCGAGCAGGCGCATGTGGCCATCGGCAACGTGATGGCGATCCTCGCCGAGGCCGGCTACGGCCCCGAGCACGTGGTGCGCTGCGGCGTATGGCTGGACGACGCCCGCGATTTCTACGCGTTCAACAGCGTGTTCAAGCACTATTTCGGCGAGCACCCGCCGGCACGCGCCTGCGTGGAGAACCGCATGGTAGTGGACTGCAAGGTGGAAGTGGACTGCGTCGCCTGGAAGCGCCCGCCGCGCTGA
PROTEIN sequence
Length: 132
MSDIKRYGAEGGVGQGRQHMPFSRAVEADGWLYVSGQVPMRDGELVGGTVTEQAHVAIGNVMAILAEAGYGPEHVVRCGVWLDDARDFYAFNSVFKHYFGEHPPARACVENRMVVDCKVEVDCVAWKRPPR*