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scnpilot_p_inoc_scaffold_489

Search features with annotation key words

Displaying items 1-30 of 69 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_489_1
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

312..665
DNA (354bp) protein (118aa)
Octaprenyl-diphosphate synthase {ECO:0000313|EMBL:KGM54486.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter
scnpilot_p_inoc_scaffold_489_2
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

833..2719
DNA (1887bp) protein (629aa)
NODE_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97514.1}; EC=2.3.2.2 {ECO:0000313|EMBL:KIQ97514.1};; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; X
gamma-glutamyltranspeptidase (EC:2.3.2.2)
Gamma-glutamyltranspeptidase n=1 Tax=Caulobacter crescentus (strain NA1000 / CB15N) RepID=B8H2U6_CAUCN rbh
scnpilot_p_inoc_scaffold_489_3
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2789..4000)
DNA (1212bp) protein (404aa)
Sodium/glutamate symporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W596_9GAMM rbh
NODE_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97513.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lyso
sodium:glutamate symporter
scnpilot_p_inoc_scaffold_489_4
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4456..4851)
DNA (396bp) protein (132aa)
Endoribonuclease L-PSP n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46U09_CUPPJ
Endoribonuclease L-PSP {ECO:0000313|EMBL:AKC86989.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthom
endoribonuclease L-PSP
scnpilot_p_inoc_scaffold_489_5
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4936..6360)
DNA (1425bp) protein (475aa)
dan; D-aminoacylase Dan (EC:3.5.1.81)
Amidohydrolase n=1 Tax=Pseudomonas psychrotolerans L19 RepID=H0JGS0_9PSED rbh
D-aminoacylase {ECO:0000313|EMBL:AKC88328.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suw
scnpilot_p_inoc_scaffold_489_6
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6364..7227)
DNA (864bp) protein (288aa)
RpiR family transcriptional regulator n=1 Tax=Pseudomonas sp. 45MFCol3.1 RepID=UPI0003783279 rbh
RpiR family transcriptional regulator {ECO:0000313|EMBL:AKC86990.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source
RpiR family transcriptional regulator
scnpilot_p_inoc_scaffold_489_7
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7243..8598)
DNA (1356bp) protein (452aa)
2-keto-3-deoxygluconate permease n=1 Tax=Pseudomonas luteola RepID=UPI0002F60634 rbh
Permease DsdX {ECO:0000313|EMBL:AKC86991.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwo
gluconate transporter
scnpilot_p_inoc_scaffold_489_8
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8620..9885)
DNA (1266bp) protein (422aa)
D-serine deaminase 1 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T2T9_ALCXX rbh
Amino acid deaminase {ECO:0000313|EMBL:AKC86992.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomon
amino acid aldolase or racemase
scnpilot_p_inoc_scaffold_489_9
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10094..12385
DNA (2292bp) protein (764aa)
Malic enzyme {ECO:0000313|EMBL:AHY57778.1}; EC=1.1.1.40 {ECO:0000313|EMBL:AHY57778.1};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotro
malic enzyme n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E46FC6 rbh
NAD-binding malic protein
scnpilot_p_inoc_scaffold_489_10

Not on your lists

comp(12485..13204)
DNA (720bp) protein (240aa)
Putative autoinducer-binding transcriptional regulator LuxR family n=1 Tax=mine drainage metagenome RepID=E6QPQ1_9ZZZZ
Putative autoinducer-binding transcriptional regulator LuxR family {ECO:0000313|EMBL:CBI09222.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drai
AfeR; autoinducer-binding transcriptional regulator LuxR family
scnpilot_p_inoc_scaffold_489_11
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13353..13724
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CSX8_THIA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ88397.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22
scnpilot_p_inoc_scaffold_489_12

Not on your lists

13887..14489
DNA (603bp) protein (201aa)
solI; Autoinducer synthesis protein solI (EC:2.3.1.184)
Autoinducer synthesis protein solI n=1 Tax=mine drainage metagenome RepID=E6QVK5_9ZZZZ
Autoinducer synthesis protein solI {ECO:0000313|EMBL:CBI11278.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
scnpilot_p_inoc_scaffold_489_13
unknown

Not on your lists

14686..14820
DNA (135bp) protein (45aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_489_14
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14893..16587)
DNA (1695bp) protein (565aa)
NODE_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97512.1}; EC=3.5.1.81 {ECO:0000313|EMBL:KIQ97512.1};; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
Amidohydrolase family protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NHV1_9SPHN rbh
amidohydrolase family protein
scnpilot_p_inoc_scaffold_489_15
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16673..16870
DNA (198bp) protein (66aa)
Uncharacterized protein n=9 Tax=Stenotrophomonas RepID=B2FTT1_STRMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDE89512.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
scnpilot_p_inoc_scaffold_489_16
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16879..17991
DNA (1113bp) protein (371aa)
Glycosyl transferase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L911_9GAMM rbh
Glycosyl transferase {ECO:0000313|EMBL:EED39524.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas
group 1 glycosyl transferase
scnpilot_p_inoc_scaffold_489_17
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17972..19315
DNA (1344bp) protein (448aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003050B80 rbh
Membrane protein {ECO:0000313|EMBL:KGM56482.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresiste
membrane protein
scnpilot_p_inoc_scaffold_489_18
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19303..20229)
DNA (927bp) protein (309aa)
Lipid A biosynthesis lauroyltransferase {ECO:0000256|HAMAP-Rule:MF_01942}; EC=2.3.1.241 {ECO:0000256|HAMAP-Rule:MF_01942};; Kdo(2)-lipid IV(A) lauroyltransferase {ECO:0000256|HAMAP-Rule:MF_01942}; Tax
lauroyl acyltransferase n=1 Tax=Xanthomonas sacchari RepID=UPI000263037B rbh
lipid A biosynthesis lauroyl acyltransferase
scnpilot_p_inoc_scaffold_489_19
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20351..21646
DNA (1296bp) protein (432aa)
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:EZP46756.1}; EC=2.-.-.- {ECO:0000313|EMBL:EZP46756.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonad
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L915_9GAMM rbh
3-deoxy-D-manno-octulosonic-acid transferase
scnpilot_p_inoc_scaffold_489_20
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21747..23105)
DNA (1359bp) protein (453aa)
TolC family type I secretion outer membrane protein n=2 Tax=Stenotrophomonas maltophilia RepID=M5THL3_STEMA rbh
Protein CyaE {ECO:0000256|PIRNR:PIRNR001892}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia gr
tolC; type I secretion outer membrane protein, TolC precursor
scnpilot_p_inoc_scaffold_489_21
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23130..23777)
DNA (648bp) protein (216aa)
pcm2; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
protein-L-isoaspartate O-methyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031DDC39 rbh
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:AHY57790.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" so
scnpilot_p_inoc_scaffold_489_22
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23908..24573)
DNA (666bp) protein (222aa)
TetR family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DE58A6 rbh
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCH14043.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotr
scnpilot_p_inoc_scaffold_489_23
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24681..25802
DNA (1122bp) protein (374aa)
RND transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E4588B rbh
RND family efflux transporter MFP subunit
Putative multidrug resistance protein mdtA {ECO:0000313|EMBL:CCP13103.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Ste
scnpilot_p_inoc_scaffold_489_24
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25806..28967
DNA (3162bp) protein (1054aa)
Acr/RND family transmembrane transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030538DD rbh
Multidrug transporter AcrB {ECO:0000313|EMBL:AHY57793.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotroph
smeP; drug-resistance cell envelope-like protein rbh
scnpilot_p_inoc_scaffold_489_25
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29084..32056
DNA (2973bp) protein (991aa)
diguanylate cyclase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00037BB2A9 rbh
putative signal protein with GGDEF, PAS and PAC domains rbh
Putative signal protein with GGDEF, PAS and PAC domains {ECO:0000313|EMBL:AEL08526.1}; TaxID=990315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomon
scnpilot_p_inoc_scaffold_489_26
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32134..33078
DNA (945bp) protein (315aa)
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadac
pip; proline iminopeptidase (EC:3.4.11.5)
proline iminopeptidase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000319E54B rbh
scnpilot_p_inoc_scaffold_489_27
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33133..34044)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VJA1_STEMA rbh
Uncharacterized protein {ECO:0000313|EMBL:EJP78339.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_489_28
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34124..35536
DNA (1413bp) protein (471aa)
MFS transporter n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5U0F3_STEMA rbh
MFS transporter {ECO:0000313|EMBL:EMI51326.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia g
major facilitator superfamily protein
scnpilot_p_inoc_scaffold_489_29
unknown

Not on your lists

35533..35658
DNA (126bp) protein (42aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_489_30
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35718..36524)
DNA (807bp) protein (269aa)
N-formylglutamate amidohydrolase n=1 Tax=Pseudomonas geniculata RepID=UPI00029B4FE1 rbh
N-formylglutamate amidohydrolase
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:KDE91499.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomo
Displaying items 1-30 of 69 in total

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