ggKbase home page

cn_combo_scaffold_5020_3

Organism: CN-SCN_Erythrobacter_14x

partial RP 39 / 55 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(2367..4493)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MWJ6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 700.0
  • Bit_score: 656
  • Evalue 3.90e-185
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 706.0
  • Bit_score: 599
  • Evalue 9.50e-169
Tax=BJP_IG2102_Porphyrobacter_62_18 similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 708.0
  • Bit_score: 1165
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_IG2102_Porphyrobacter_62_18 → Porphyrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2127
ATGAAATTTACCCGACTTTTCCGGGCAAGCCTGTTTGCCGGATGCACTCTTGTGGCAGCGCCGCCTGCACTTGCCGAACATTCCACCACGCCCCAGACGCGTGAAGACCCGCTCACTGACACAATTATCGTCACCGCCAGCAGAAGCGGACGGGAAGCCATCGCCAGCGACGCGGTTGCGGCACCCCGCCAGATTGCCCTTCCCGCCGATGCCGCCGCGATTGCAGCGCGGGTGGCGGGCGGCGATATCTTCGGCAATGGCGCATTGTCGGGCCAGCTTTCCTATCGCGGCCTTGCCGGAGAACGCGTGCTGGGACGGGTCAATGGCCAGCGCTTCGCCACCGGCGGCCCCAATGCGATGGACCCGCCGATGCACTATGCGCCCTCCATCTTGGTGGAACGCATTGATGTGGCGCGCGGGGTCGCGCCGGTTGCCGAAGGGCCTTCGCTGGGCGGTGCGATCAACGCGCAGCTTGCCGAAGCGCAATTCACGAATAGTGCCAGCCTCACCCCGCAATTGCGCGCGGCGAGCCAGTATCGCAGCGTCGATAACAGCTATGCCGCAGGTGGGCTGGCGGCGCTCGCCAATGACACCTGGCGGGTCGGCCTGATCGCCAGCCGCGAGGAGGGCGAGGATTATCGCTTTCCCGGCGGGCGCGCGGTCGGCACCCTGTTCGAACGCAATCTCTATGGCATCCACGCCGGATACCGCATGGGTGCGGGCGAATTGTTCCTTGAATATCGTCGCAGCGAAACCGGGCCTTCGGGCAATCCGCCCTTTGCACTCGACATGGTCTATTTCGACACCGATTTCGTGCAGGGCGGCTTTCGCGGCGAACTGGCAGAAGATGTCTCCTTCAATCTCAGGCTGGGCCATGTCGCGGTGCGTCACCTGATGGACAACCAGACCCTGCGCCAGCCTGCCGCTGCGCCGGCGCAGGCGCGTGCGACCTTTGCCGATGCCGACACCATGACGGCAGAAGCAGCGCTGAGGTTCGGCAAGCCCACGCGCTATGTCGAGGTTGGCGCTGATGCCGAAATCCATGATCGTTTTGTCACGATCACCAACCCGTTCAATCCGGCGTTCTTCATCGATTCCCAGCCCAATGTCACCGCCGAGCGGCTGGGGGCCTATGTGCAGGCGCGCGGCGGCCTTGGCGTGGTGGAATTCGAGGCAGGCGCGCGGGTTGACCGCACGCAGCAATCGGCTGGCATCCCGCAATTGGGCGCGGCGGTTCCGATGGGCCCGCGCACGCTGGCCAATCAGTTCATCGCTTCGGGGCGTGAAGCGGCCGACACCACCTTTGATGCGGTGCTGCGCGCGTGGCTCCCCGGCGATGTGCTGACACCGCGCGTGACGCTGGCCCGCAAAAGCCGCGTGCCAAGCGTGCTTGAACGCTTTGCCTGGCTGCCCACCGAGGCGAGCTTTGGCCTTGCCGATGGCAATATCTATGTCGGCAATCAGGCCCTGCGCCCTGAGGTGGCCTATATTGCCGAGGCTGGGTTTGATTTCAGCAATGACTGGCTGACTGTGCGCCCCACGATCTTCTACCGCCGGGTGGAGGATTTCATTCAGGGCACGCCGTTTGATGATACGCCCGGTGTGATCAACAGCGTGGTAGAGATGGTGGCCGCTGCCAATGGCGATCCCACTCCGCTTAAATTCCGCAACACCTCAGCCGAGCTTTACGGCGCGGATATGGATTTCGTGATCCGTCCGGTAGCGCAGGTGGAACTGGCGGGCACGGCGAGCTTTGTGAGGGGCCAGCGGCGCGACATTGCCGATGATCTCTATCGCATCCCGCCTGCCAATCTGAGGGTCTCGGCGACATGGGCGACGGACCGGCTGGCCCTGGGGGCAGAGCTGTTTGCCGCGGCCAATCAGCCTAAGGTTTCGCGCACCAATGACGAGGAGCGGGGCGAAGGCTTTGCCGTCGTCGGCCTGTTTGCACGCTATGCCTTTACCGAAGCGCTGGCGCTGGAAGCGGGCGTGGAGAACCTGTTTGATGAACTCTACGCGCCCCATCTCGCCGGACGCAGCCGGGTGGGGGCGTCGGATGTCCCGCTGCTCGAACGCTTGCCGGGGCCGGGGCGCGGGGTGTGGACGCGGCTGACGGCCCGGTTCTAG
PROTEIN sequence
Length: 709
MKFTRLFRASLFAGCTLVAAPPALAEHSTTPQTREDPLTDTIIVTASRSGREAIASDAVAAPRQIALPADAAAIAARVAGGDIFGNGALSGQLSYRGLAGERVLGRVNGQRFATGGPNAMDPPMHYAPSILVERIDVARGVAPVAEGPSLGGAINAQLAEAQFTNSASLTPQLRAASQYRSVDNSYAAGGLAALANDTWRVGLIASREEGEDYRFPGGRAVGTLFERNLYGIHAGYRMGAGELFLEYRRSETGPSGNPPFALDMVYFDTDFVQGGFRGELAEDVSFNLRLGHVAVRHLMDNQTLRQPAAAPAQARATFADADTMTAEAALRFGKPTRYVEVGADAEIHDRFVTITNPFNPAFFIDSQPNVTAERLGAYVQARGGLGVVEFEAGARVDRTQQSAGIPQLGAAVPMGPRTLANQFIASGREAADTTFDAVLRAWLPGDVLTPRVTLARKSRVPSVLERFAWLPTEASFGLADGNIYVGNQALRPEVAYIAEAGFDFSNDWLTVRPTIFYRRVEDFIQGTPFDDTPGVINSVVEMVAAANGDPTPLKFRNTSAELYGADMDFVIRPVAQVELAGTASFVRGQRRDIADDLYRIPPANLRVSATWATDRLALGAELFAAANQPKVSRTNDEERGEGFAVVGLFARYAFTEALALEAGVENLFDELYAPHLAGRSRVGASDVPLLERLPGPGRGVWTRLTARF*