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cn_combo_scaffold_1566_11

Organism: CN-SCN_Erythrobacter_14x

partial RP 39 / 55 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(10414..11298)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002D5F1C7 similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 279.0
  • Bit_score: 525
  • Evalue 2.60e-146
LysR family transcriptional regulator {ECO:0000313|EMBL:KEO93031.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 294.0
  • Bit_score: 550
  • Evalue 1.80e-153
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 294.0
  • Bit_score: 485
  • Evalue 1.40e-134
  • rbh

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Taxonomy

Erythrobacter litoralis → Erythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGCCTGCACGTCGTCTGCCCCCCTTGCGCGCTCTTGAAGCTTTTATGCGCACCGTTCGTCTCGGCTCAGCTCGGGCTGCCGCCGAGGAGATTGGGCTCAGCCCTTCGGCCTTGTCACGGCGCATCACCAATCTTGAAGAGTTTGTCGGGAAAAAGCTGTTCACGCGGGCGCGCCAGTCGATGCAGCTCACCGATGAGGGGCAGGCCTTTTATGAGGCTGTGAACCCCCACATGGAGGCGCTTGCCCGGGCCGTGGAAAGCCAATCGGATAATATTGCCCTATTGCGTCTCAGGCTGGGGGTCCTCCCGATGTTTGGCAGCCAGCGTCTGTTCCCGCGGCTCGGTGAATTGCGCAAGCGTCACCCATTGCTGCACATCGATATCGACACCGCTCCTCACCTTGAAGACCGCGTGGGTGACACGCTCGACGCCGCGATTATCCTGTCGCGAGGGCCCGCCAGCGGGCTTCATGCAGTTCGTCTCGATCACAATCTGGTGCACGCGATCTGCAGCAAGGAACTGGCGCGCGGGATTGGCAATGTGGTGACGCCGGAGACCATGGCAAAGCAAACCTTTCTCATTCATAACGAATTGCCCGAAAGCTTTGTTGCGTGGAAAAAGGCCAACAGCCTTGAAGATATGGATCCGGTGGCGATTGACCATTACGATTCGGGCCAACTCATGCTTGAGGCCGCTGCTCAGGGGCTCGGCATTGCGATCATGCATGACGACCACCTGCGGCGGGCCGGTGACAATCGGCTGACCAATCTGCCGGGCGTTCCGGTGGAAAGCCCTTATTCCTATTGGTTTGTGTGCAAGCCGGTGGCCCTTGAAAGCCGCCCGGTCCGGCTGTTTCACGATTGGCTGGTGCGCGCGGGGCTGTAG
PROTEIN sequence
Length: 295
MPARRLPPLRALEAFMRTVRLGSARAAAEEIGLSPSALSRRITNLEEFVGKKLFTRARQSMQLTDEGQAFYEAVNPHMEALARAVESQSDNIALLRLRLGVLPMFGSQRLFPRLGELRKRHPLLHIDIDTAPHLEDRVGDTLDAAIILSRGPASGLHAVRLDHNLVHAICSKELARGIGNVVTPETMAKQTFLIHNELPESFVAWKKANSLEDMDPVAIDHYDSGQLMLEAAAQGLGIAIMHDDHLRRAGDNRLTNLPGVPVESPYSYWFVCKPVALESRPVRLFHDWLVRAGL*