ggKbase home page

cn_combo_scaffold_2822_23

Organism: CN-SCN_Erythrobacter_14x

partial RP 39 / 55 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(22115..22774)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002FADA80 similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 219.0
  • Bit_score: 371
  • Evalue 4.60e-100
Pseudouridine synthase {ECO:0000313|EMBL:KEO96402.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter l similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 219.0
  • Bit_score: 352
  • Evalue 3.10e-94
pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 219.0
  • Bit_score: 293
  • Evalue 4.50e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Erythrobacter litoralis → Erythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGACGCTTCCCATCCTCTATGAAGACGGCGAGGCGCTGGTGATTGACAAGCCTGCCGGCCTGCCGATTGACCGCCCGCGCAAGGGCGGGCCGAGCCTTGTCAATCACCTTGATGCCCTGCGTCTGGGGTTTCAGCGCGAACCTGTGGCGGTGCACCGGCTGGACACGGACACGTCCGGCTGCCTGCTCCTCGCCCGCAATCCCAAGGCGCTCGCCCGGTTCAATCGCGCTTTTGAAGAACGCGCCGTGGCCAAGACCTATCTCGCGCTCCTGGCTGGCCATCCCCCCGGCACCAGCGGGACAATTGAGCTGGCGCTCGCCAAGATCAGCTCGGCCGAAAAAGGCTGGCGGATGATCGTGGCCAAGAAAGGCAAGCCCGCGGTTTCGCACTGGGAGTTGGTGGAAACGCTGGGCGCGCACAGCCTGATCCGCTTTCGCCCCGAAACCGGCCGCACGCATCAATTGCGGGTGCATGCCCTCAAGGGCCTTGGCGCGCCTTTGCTGGGCGATCCGGTCTATGGCGCAGGGACGCAAGGCGCGGCCAAGCGCACCATGCTGCACGCGGTAAGCCTCGCAATGACGCGCGCGGGCAAGACGCCGATCGAAGCAAACTCGCCGCTGCCTGCCGACTTCCGCAGCTTTGGGGTGAGCGATGGGTGA
PROTEIN sequence
Length: 220
MTLPILYEDGEALVIDKPAGLPIDRPRKGGPSLVNHLDALRLGFQREPVAVHRLDTDTSGCLLLARNPKALARFNRAFEERAVAKTYLALLAGHPPGTSGTIELALAKISSAEKGWRMIVAKKGKPAVSHWELVETLGAHSLIRFRPETGRTHQLRVHALKGLGAPLLGDPVYGAGTQGAAKRTMLHAVSLAMTRAGKTPIEANSPLPADFRSFGVSDG*