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cn_combo_scaffold_4732_4

Organism: CN-SCN_Erythrobacter_14x

partial RP 39 / 55 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(2755..3759)

Top 3 Functional Annotations

Value Algorithm Source
RNA procession exonuclease-like protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E2611D similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 336.0
  • Bit_score: 596
  • Evalue 2.30e-167
Scaffold4, whole genome shotgun sequence {ECO:0000313|EMBL:KIS32783.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 334.0
  • Bit_score: 571
  • Evalue 1.10e-159
mRNA 3-end processing factor similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 335.0
  • Bit_score: 547
  • Evalue 3.40e-153

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Taxonomy

Novosphingobium sp. P6W → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
ATGACCGCGCCCTTTTCCTGGATCCGGCCCGAACCTTGGGGCATCCACATCGCGCCCGCCGATGTGTGGGTCGATCCGGCCCGCGCCGTGCCGCGCGCGCTGGTCACCCACGGCCATGCCGATCATGCGCGCGGCGGGCACGGCGAGACGATAGCCACGCCCGCAACGCTCGCCATCATGAAGTTGCGCTACGCAACTTCTGCCGGAGCGCAGCCTGCCGCCTATGGCGAGGAAGTGGCGCTCGGCGGCGGGGTGACGGCCACCTTATTGCCCGCAGGCCATGTATTGGGCTCTGCGCAAATCCTGCTCGAACACGCGGGCGAGCGGGTGATTATCACCGGCGATTACAAGCGCGCCCCTGATCCCACCTGCACGCCCTTCGCGGTCACCCCTTGCGACATCTTCATCACCGAGGCGACCTTTGGCCTTCCCGTCTTCACCCATCCGCCGATCGGTGAGGAAATCGGGAAGCTGCTCGCCGCGCGCGCTGCCAATCCCGATTCGGCGGTGCTGGTGGGCGCCTATGCGCTCGGGAAGGCGCAGCGGGTGATTGCGGAGCTGCGCGCGGCGGGGCACAGCGACACCATCTGGCTCCACGGGGCGATGGAGAAAATGTGCCGCCTGTATGAGGAACATGGCGTCGCACTGGGTGATCTCAAGCTGGTAAGCGATGCGGGCAAGGCCGACCTTGCGGGCGCTATCGTGATTGCGCCGCCTGCCGCGCTCAATGATCGCTGGAGCCGCCGCTTGCCCAATCCGATCACCGCCATGGCGAGCGGGTGGATGCGGGTGCGCGGGCGGGCGCGCCAGCGGGGGGTGGAACTGCCGCTGGTGATCTCCGATCATGCCGACTGGAATGAACTCACCCAGACCATCGCCGAGGTGAACCCGGCGGAGACCTGGATCACCCACGGCCGCGAGGAAGCCCTGCTGCGCTGGTGCGAACTCAGCCAGCGCCGCGCGCGCGCACTGGCGCTGGTCGGCTATGAGGACGAGGACGACTGA
PROTEIN sequence
Length: 335
MTAPFSWIRPEPWGIHIAPADVWVDPARAVPRALVTHGHADHARGGHGETIATPATLAIMKLRYATSAGAQPAAYGEEVALGGGVTATLLPAGHVLGSAQILLEHAGERVIITGDYKRAPDPTCTPFAVTPCDIFITEATFGLPVFTHPPIGEEIGKLLAARAANPDSAVLVGAYALGKAQRVIAELRAAGHSDTIWLHGAMEKMCRLYEEHGVALGDLKLVSDAGKADLAGAIVIAPPAALNDRWSRRLPNPITAMASGWMRVRGRARQRGVELPLVISDHADWNELTQTIAEVNPAETWITHGREEALLRWCELSQRRARALALVGYEDEDD*