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cn_combo_scaffold_11910_4

Organism: CN-SCN_Erythrobacter_14x

partial RP 39 / 55 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(3668..5158)

Top 3 Functional Annotations

Value Algorithm Source
Retinal pigment epithelial membrane protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S1E6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 44.7
  • Coverage: 499.0
  • Bit_score: 412
  • Evalue 7.00e-112
Retinal pigment epithelial membrane protein {ECO:0000313|EMBL:EEB77471.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobact similarity UNIPROT
DB: UniProtKB
  • Identity: 44.7
  • Coverage: 499.0
  • Bit_score: 412
  • Evalue 9.80e-112
carotenoid cleavage dioxygenase similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 485.0
  • Bit_score: 396
  • Evalue 1.50e-107

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Taxonomy

marine gamma proteobacterium HTCC2148 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1491
ATGAACGTCGCTGCCAAGATCGCCTCGCCCAGCCGCGCCGCCCCCTATGGCCACCCGGGGTTTGATCCGATCAGCCGCGAAATGTGCGGCGTGGACCTGGTGGTCGAAGGCGAATTACCAGCCGAACTCGATGGCGTGTTCCTGCGCAACGGCACCAACGCCCTGTTTCCGGCCCGCCGCCGCCACATGTTCGATGGTGAGGCGATGCTGCACATGATCGAATTTCGCGGCGGCAAAGCGCGCTATTCCAACACACTCGTGCGCACACCGCGCACGCGTTATGTCGAACAGGCTGGCCGCAATCCCTTCCTTGGCATCGCCGAAATGACCAGTGGCGGCAAATCCGCTCTGCTTGCCCTTATGATCGAACGGGTGAAAGTTCGCTTTGGCCTCTTGCCGCGCTTCACGCCGATTGAGGCCGGCAATAATGGCACTGCGGTCTTGCATCATGATCGCAGCCTTTATTGCTTACAGGAAACCGCGCTGCCTTTTCGGCTTGATGTCGCGCGCGATGATGATGGCTGGCTGGCTTTGAACGGACAAGGCCGCAACGAAACTTTCAAAGGCCGGCTGGCCTGCCCGTTCAGCGCTCATCCCAAAAGCGACGAGCGCACCGGCGCGGTCTATTCGATCGGGCAGGATTTTGTCTCAGGCACCACCCATCTCAGCGTTCTGGAGAAAGGCGGTGCCATTCACACCAGCACAATCATGCAGGGCAAGCCTGCGGCCTTCTTCGTGCATGATTACATCCTCACCGATACCCACATCATCTTCCCCGACACATCGCTGCGCTTCAATCCGGCAGGATTGGCCGGGCCCGATGCCAGTGTCGCTACATTCGACCGATCGCACAATTTGCGCTTTGGAATGATCGCCCGCGATCACCGCGATGGCGACCCGGTGCGCTGGTTTGAAACCTCGGCGCCAGGCCATATCTGGCACATCGCCAATGGCTGGCAGGCCGACGGCGCCATCCATATCTACGCCCCGGTCTTTGCCGATTACCCGGCCACCATGCCGATCCATTCCCCGCAAGAGCCCCATTCACGCTTTGTCCACTGGCGGCTGGATCTGGCGAGCGGCGCAGTGAGCGAGCGCGTCCTGCTCAATCATCATTATGAACGCCCCGGCATTGACTGGCGTCGCCATGGCGTGGCGTCGCGCTATGCCTGGCTGCTTGATGAAAGCGGCGGCGTGATGGGCAAAGGCGTGCTCAAATATGATCTGTTTAACGAGAGCGGAGCCGGCTATCTCGATTACGGCGATCTGTTGGGCGGCGAGCCGGTGTTTGTGCCGCGCAAGCACGGCACGCTTGAGGATGATGGCTGGCTGATTGATCTGCTGGCCGATGGCACACGCGCCGAGATCCTGGTTGCCGATGCCGCGACCATGACGCCGCAATGCCGCATTGCCTTGCCGCAGCCAGTGCCTTTCGGAGTGCACGCCTTGTGGCTTGATCGCACCGCGACCGACGCGCTGATCACGGATTGA
PROTEIN sequence
Length: 497
MNVAAKIASPSRAAPYGHPGFDPISREMCGVDLVVEGELPAELDGVFLRNGTNALFPARRRHMFDGEAMLHMIEFRGGKARYSNTLVRTPRTRYVEQAGRNPFLGIAEMTSGGKSALLALMIERVKVRFGLLPRFTPIEAGNNGTAVLHHDRSLYCLQETALPFRLDVARDDDGWLALNGQGRNETFKGRLACPFSAHPKSDERTGAVYSIGQDFVSGTTHLSVLEKGGAIHTSTIMQGKPAAFFVHDYILTDTHIIFPDTSLRFNPAGLAGPDASVATFDRSHNLRFGMIARDHRDGDPVRWFETSAPGHIWHIANGWQADGAIHIYAPVFADYPATMPIHSPQEPHSRFVHWRLDLASGAVSERVLLNHHYERPGIDWRRHGVASRYAWLLDESGGVMGKGVLKYDLFNESGAGYLDYGDLLGGEPVFVPRKHGTLEDDGWLIDLLADGTRAEILVADAATMTPQCRIALPQPVPFGVHALWLDRTATDALITD*