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scnpilot_expt_750_p_scaffold_525

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_525_1
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..990)
DNA (990bp) protein (330aa)
hypothetical protein, partial n=1 Tax=Thiobacillus thioparus RepID=UPI0003736D19
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ADZ25222.1}; Flags: Precursor;; TaxID=153948 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae
scnpilot_expt_750_p_scaffold_525_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1038..1535)
DNA (498bp) protein (166aa)
purine-binding chemotaxis protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000366DA2B rbh
CheW protein; K03408 purine-binding chemotaxis protein CheW Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cheW4; chemotaxis protein CheW
scnpilot_expt_750_p_scaffold_525_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1574..3679)
DNA (2106bp) protein (702aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilacea
chemotaxis protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003650561 rbh
signal transduction histidine kinase CheA-like protein
scnpilot_expt_750_p_scaffold_525_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3726..4091)
DNA (366bp) protein (122aa)
response regulator receiver domain-containing protein; K03413 two-component system, chemotaxis family, response regulator CheY id=12493524 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
response regulator receiver domain-containing protein; K03413 two-component system, chemotaxis family, response regulator CheY Tax=GWE1_Thiobacillus_62_9_curated
response regulator receiver domain-containing protein
scnpilot_expt_750_p_scaffold_525_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4144..4695)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003669B39
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_expt_750_p_scaffold_525_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4704..5609)
DNA (906bp) protein (302aa)
flagellar hook-associated protein FlgL n=1 Tax=Thiobacillus denitrificans RepID=UPI000360BB60 rbh
flgL; flagellar hook-associated protein FlgL
Flagellin, flagellar hook-associated protein 3 FlgL {ECO:0000313|EMBL:AAZ97580.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacill
scnpilot_expt_750_p_scaffold_525_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5625..7598)
DNA (1974bp) protein (658aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000362AE76 rbh
flgK; flagellar hook-associated protein FlgK
Flagellar hook-associated protein {ECO:0000313|EMBL:AAZ97581.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacil
scnpilot_expt_750_p_scaffold_525_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7691..8524)
DNA (834bp) protein (278aa)
flagellar rod assembly protein FlgJ n=1 Tax=Thiobacillus denitrificans RepID=UPI000375989F rbh
mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; K02395 flagellar protein FlgJ Tax=GWE1_Thiobacillus_62_9_curated
mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
scnpilot_expt_750_p_scaffold_525_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8525..9622)
DNA (1098bp) protein (366aa)
flagellar P-ring protein FlgI n=1 Tax=Thiobacillus denitrificans RepID=UPI00037EBAD7 rbh
flgI; flagellar basal body P-ring protein; K02394 flagellar P-ring protein precursor FlgI Tax=GWE1_Thiobacillus_62_9_curated
flgI; flagellar basal body P-ring biosynthesis protein FlgA
scnpilot_expt_750_p_scaffold_525_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9635..10303)
DNA (669bp) protein (223aa)
flagellar L-ring protein FlgH n=1 Tax=Thiobacillus denitrificans RepID=UPI000380FA1D rbh
flagellar L-ring protein FlgH; K02393 flagellar L-ring protein precursor FlgH Tax=GWE1_Thiobacillus_62_9_curated
flagellar L-ring protein FlgH
scnpilot_expt_750_p_scaffold_525_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10312..11604)
DNA (1293bp) protein (431aa)
flagellar basal body rod protein FlgF n=1 Tax=Thiobacillus denitrificans RepID=UPI00037FD335 rbh
flgF; flagellar basal body rod protein FlgF rbh
Flagellar basal body rod protein FlgF {ECO:0000313|EMBL:AAZ97586.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="
scnpilot_expt_750_p_scaffold_525_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11636..12862)
DNA (1227bp) protein (409aa)
flagellar hook protein FlgE n=1 Tax=Thiobacillus denitrificans RepID=UPI00036281D7 rbh
flgE; flagellar hook protein FlgE; K02390 flagellar hook protein FlgE Tax=GWE1_Thiobacillus_62_9_curated
flgE; flagellar hook protein FlgE
scnpilot_expt_750_p_scaffold_525_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12901..13566)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003778E9F rbh
flgD; flagellar basal body rod modification protein
Flagellar basal-body rod modification protein FlgD {ECO:0000313|EMBL:AAZ97588.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillu
scnpilot_expt_750_p_scaffold_525_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13580..13984)
DNA (405bp) protein (135aa)
flagellar basal body rod protein FlgC n=1 Tax=Thiobacillus denitrificans RepID=UPI0003662262
flagellar basal-body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC Tax=GWE1_Thiobacillus_62_9_curated
flagellar basal body rod protein FlgC
scnpilot_expt_750_p_scaffold_525_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13996..14403)
DNA (408bp) protein (136aa)
flagellar biosynthesis protein FlgB n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A5A2D
flagellar basal-body rod protein FlgB; K02387 flagellar basal-body rod protein FlgB Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
flagellar basal-body rod protein FlgB
scnpilot_expt_750_p_scaffold_525_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14588..15301
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036511CB rbh
flgA; flagellar basal body P-ring biosynthesis protein FlgA; K02386 flagella basal body P-ring formation protein FlgA Tax=GWE1_Thiobacillus_62_9_curated
flgA; flagellar basal body P-ring biosynthesis protein FlgA
scnpilot_expt_750_p_scaffold_525_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15400..15696
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003661CDC
putative anti-sigma-28 factor, FlgM; K02398 negative regulator of flagellin synthesis FlgM Tax=GWE1_Thiobacillus_62_9_curated
anti-sigma-28 factor, FlgM
scnpilot_expt_750_p_scaffold_525_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15683..16174
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003649742
putative flagella synthesis protein FlgN; K02399 flagella synthesis protein FlgN Tax=GWE1_Thiobacillus_62_9_curated
flagella synthesis protein FlgN
scnpilot_expt_750_p_scaffold_525_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16175..17992)
DNA (1818bp) protein (606aa)
FAD-dependent cmnm(5)s(2)U34 oxidoreductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037927C2 rbh
mnmC; 5-methylaminomethyl-2-thiouridine methyltransferase
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000255|HAMAP-Rule:MF_01102}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000255|HAMAP-Rule:MF_011
scnpilot_expt_750_p_scaffold_525_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18038..19210
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000360E6B1
secretion protein HlyD; K02005 HlyD family secretion protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
secretion protein HlyD
scnpilot_expt_750_p_scaffold_525_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19207..19878
DNA (672bp) protein (224aa)
ABC transporter n=1 Tax=Thiobacillus thioparus RepID=UPI00035E0465
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ABC transporter-like protein
scnpilot_expt_750_p_scaffold_525_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19875..21077
DNA (1203bp) protein (401aa)
peptide ABC transporter permease n=1 Tax=Thiobacillus thioparus RepID=UPI00036B9511
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_p_scaffold_525_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21074..22273
DNA (1200bp) protein (400aa)
peptide ABC transporter permease n=1 Tax=Thiobacillus thioparus RepID=UPI0003623CEB
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_expt_750_p_scaffold_525_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22567..22875)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381CA9C
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_p_scaffold_525_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23022..23582
DNA (561bp) protein (187aa)
methylated-DNA--protein-cysteine methyltransferase; K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000368A4B7
O-6-methylguanine DNA methyltransferase
scnpilot_expt_750_p_scaffold_525_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23677..24291
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036B5378 rbh
membrane protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_expt_750_p_scaffold_525_27
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24358..25269)
DNA (912bp) protein (304aa)
heterodisulfide reductase, B subunit (EC:1.8.98.1)
Heterodisulfide reductase, B subunit {ECO:0000313|EMBL:AAZ97598.1}; EC=1.8.98.1 {ECO:0000313|EMBL:AAZ97598.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; H
heterodisulfide reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F5F55
scnpilot_expt_750_p_scaffold_525_28
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25280..25912)
DNA (633bp) protein (211aa)
heterodisulfide reductase subunit C (EC:1.8.98.1)
Heterodisulfide reductase subunit C {ECO:0000313|EMBL:AAZ97599.1}; EC=1.8.98.1 {ECO:0000313|EMBL:AAZ97599.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hy
heterodisulfide reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D510E rbh
scnpilot_expt_750_p_scaffold_525_29
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25965..28223)
DNA (2259bp) protein (753aa)
Heterodisulfide reductase, subunit A {ECO:0000313|EMBL:AAZ97600.1}; EC=1.8.98.1 {ECO:0000313|EMBL:AAZ97600.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; H
heterodisulfide reductase subunit A (EC:1.8.98.1) rbh
heterodisulfide reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI000377FC61 rbh
scnpilot_expt_750_p_scaffold_525_30
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28227..29510)
DNA (1284bp) protein (428aa)
heterodisulfide reductase subunit A (EC:1.8.98.1)
Heterodisulfide reductase, subunit A {ECO:0000313|EMBL:AAZ97601.1}; EC=1.8.98.1 {ECO:0000313|EMBL:AAZ97601.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; H
heterodisulfide reductase subunit A n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C5D17 rbh
Displaying items 1-30 of 98 in total

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