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scnpilot_expt_750_p_scaffold_234

Search features with annotation key words

Displaying items 1-30 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_234_1
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(84..3032)
DNA (2949bp) protein (983aa)
hypothetical protein n=1 Tax=unclassified Verrucomicrobia (miscellaneous) RepID=UPI0003810495 rbh
type III restriction protein res subunit Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
hypothetical protein
scnpilot_expt_750_p_scaffold_234_2
unknown

Not on your lists

3482..4096
DNA (615bp) protein (205aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_234_3
unknown

Not on your lists

4069..10980
DNA (6912bp) protein (2304aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_234_4
unknown

Not on your lists

10980..14828
DNA (3849bp) protein (1283aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_234_5
unknown

Not on your lists

15155..19021
DNA (3867bp) protein (1289aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_234_6
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19060..20523)
DNA (1464bp) protein (488aa)
FAD dependent oxidoreductase n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B786
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIK96539.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibact
scnpilot_expt_750_p_scaffold_234_7
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20613..22340
DNA (1728bp) protein (576aa)
yycG_8; Sensor histidine kinase YycG (EC:2.7.13.3)
Sensor histidine kinase {ECO:0000313|EMBL:AIL65894.1}; EC=2.7.13.3 {ECO:0000313|EMBL:AIL65894.1};; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Ricket
Na+/proline symporter/Histidine kinase/Response regualator receivor domain n=1 Tax=Orientia tsutsugamushi (strain Boryong) RepID=A5CED2_ORITB
scnpilot_expt_750_p_scaffold_234_8
Photobacterium damselae, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22412..23371
DNA (960bp) protein (320aa)
Putative uncharacterized protein n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z395_LISDA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEZ39876.1}; TaxID=675817 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium
scnpilot_expt_750_p_scaffold_234_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23565..23846
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) RepID=Q4UMV8_RICFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIL13153.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;
scnpilot_expt_750_p_scaffold_234_10
unknown

Not on your lists

comp(23889..24656)
DNA (768bp) protein (256aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_234_11
Commensalibacter intestini, Commensalibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(24732..25169)
DNA (438bp) protein (146aa)
30S ribosomal protein S9 n=1 Tax=Commensalibacter intestini A911 RepID=G6F2U2_9PROT
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1088868 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae.;" s
SSU ribosomal protein S9P
scnpilot_expt_750_p_scaffold_234_12
Candidatus Rickettsia asemboensis, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(25184..25657)
DNA (474bp) protein (158aa)
50S ribosomal protein L13 n=3 Tax=Rickettsia typhi RepID=RL13_RICTY
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1068590 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickett
rplM; 50S ribosomal protein L13
scnpilot_expt_750_p_scaffold_234_13
endosymbiont of Acanthamoeba sp. UWC36, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(25683..26060)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036E0179
50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=86105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae.;" source="
scnpilot_expt_750_p_scaffold_234_14
Orientia chuto, Orientia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26053..26790)
DNA (738bp) protein (246aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Orientia tsutsugamushi (strain Boryong) RepID=A5CCN1_ORITB
scnpilot_expt_750_p_scaffold_234_15
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26792..27280)
DNA (489bp) protein (163aa)
Ribosome maturation factor RimM n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HPH1_9PROT
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillac
rimM; Ribosome maturation factor RimM
scnpilot_expt_750_p_scaffold_234_16
Rickettsia bellii, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(27288..27623)
DNA (336bp) protein (112aa)
30S ribosomal protein S16 n=2 Tax=Rickettsia bellii RepID=RS16_RICB8
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1359194 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; belli group.
scnpilot_expt_750_p_scaffold_234_17
Rickettsiales bacterium SCGC AAA041-L04, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27742..29799)
DNA (2058bp) protein (686aa)
Putative serine/threonine protein kinase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F348_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KKB96369.1}; TaxID=1607817 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium SCGC AAA041-L04.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_234_18
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29862..30734)
DNA (873bp) protein (291aa)
branched-chain amino acid transferase (ilvE-like) (EC:2.6.1.42)
Putative branched-chain amino acid transferase (IlvE-like) {ECO:0000313|EMBL:CCB64177.1}; EC=2.6.1.42 {ECO:0000313|EMBL:CCB64177.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteri
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA280-P20 RepID=UPI000374AA3C
scnpilot_expt_750_p_scaffold_234_19
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

Not on your lists

comp(30785..31696)
DNA (912bp) protein (304aa)
Pentapeptide repeat protein id=3140726 bin=GWC1_Spirochaetes_27_15 species=Anabaena cylindrica genus=Anabaena taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
pentapeptide repeat protein Tax=GWD1_Spirochaetes_27_9_curated
pentapeptide repeat-containing protein
scnpilot_expt_750_p_scaffold_234_20
endosymbiont of Acanthamoeba sp. UWC36, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31778..33565
DNA (1788bp) protein (596aa)
cytochrome C biogenesis protein n=1 Tax=Pelagibacter ubique RepID=UPI0003B69304
cytochrome c-type biogenesis protein CcmF
Cytochrome c-type biogenesis protein {ECO:0000313|EMBL:KIE04619.1}; TaxID=86105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae.;" source="endosymbiont of Acantham
scnpilot_expt_750_p_scaffold_234_21
Rickettsia bellii, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


33562..34335
DNA (774bp) protein (258aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Rickettsia bellii (strain RML369-C) RepID=RSMA_RICBR
scnpilot_expt_750_p_scaffold_234_22
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34349..35464
DNA (1116bp) protein (372aa)
cell wall shape-determining protein n=1 Tax=Thalassospira lucentensis RepID=UPI0003B5352D
mrdB; Rod shape-determining protein RodA rbh
Rod shape-determining protein RodA {ECO:0000313|EMBL:AIL64728.1}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
scnpilot_expt_750_p_scaffold_234_23
R_Alphaproteobacteria_40_19, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35597..36382)
DNA (786bp) protein (262aa)
phosphate ABC transporter ATPase; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] Tax=RIFCSPLOWO2_02_FULL_Alphaproteobacteria_40_19_curated
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI00037FDB71
pstB; phosphate import ATP-binding protein PstB 1
scnpilot_expt_750_p_scaffold_234_24
Campylobacter jejuni, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36383..37384)
DNA (1002bp) protein (334aa)
Putative phosphate transport system permease protein n=2 Tax=Campylobacter jejuni subsp. jejuni RepID=A5KFE6_CAMJU
phosphate ABC transporter permease
Putative phosphate transport system permease protein {ECO:0000313|EMBL:EDK22061.1}; TaxID=398000 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campyl
scnpilot_expt_750_p_scaffold_234_25
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37374..38552)
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-J06 RepID=UPI00035C2289
Phosphate ABC transporter permease {ECO:0000313|EMBL:KGO34290.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="De
phosphate ABC transporter permease
scnpilot_expt_750_p_scaffold_234_26
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38572..38859)
DNA (288bp) protein (96aa)
YGGT family, putative n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R5J7_9RHOB
YGGT family protein
YGGT family protein {ECO:0000313|EMBL:AIL65515.1}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
scnpilot_expt_750_p_scaffold_234_27
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38869..39570)
DNA (702bp) protein (234aa)
Outer membrane lipoprotein-sorting protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2KM55_9PROT
lipoprotein chaperone
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b
scnpilot_expt_750_p_scaffold_234_28
endosymbiont of Acanthamoeba sp. UWC8, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39567..41798)
DNA (2232bp) protein (744aa)
DNA translocase FtsK n=1 Tax=Midichloria mitochondrii (strain IricVA) RepID=F7XVW6_MIDMI rbh
DNA translocase FtsK rbh
DNA translocase FtsK {ECO:0000313|EMBL:AIF81880.1}; TaxID=86106 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae.;" source="endosymbiont of Acanthamoeba sp. UWC8.;"
scnpilot_expt_750_p_scaffold_234_29
endosymbiont of Acanthamoeba sp. UWC8, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41800..42033)
DNA (234bp) protein (78aa)
Translation initiation factor IF-1 n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I702_RHOVT
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=86106 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae.;" source="endosymbiont of Acanth
scnpilot_expt_750_p_scaffold_234_30
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42065..42934)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00035CC609
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiir
hslO; molecular chaperone Hsp33
Displaying items 1-30 of 113 in total

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