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scnpilot_expt_750_p_scaffold_475

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_475_1
unknown

Not on your lists

comp(2..232)
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_475_2

Not on your lists

comp(457..2502)
DNA (2046bp) protein (682aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ES70_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE01160.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_475_3
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2505..2798)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B6DD01
Uncharacterized protein {ECO:0000313|EMBL:EXJ14594.1}; TaxID=1249627 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp.
DNA primase
scnpilot_expt_750_p_scaffold_475_4
Shewanella sp. HN-41, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2788..3114)
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=3 Tax=Shewanella RepID=G0ARL2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGM71399.1}; TaxID=327275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. HN-41.
scnpilot_expt_750_p_scaffold_475_5
unknown

Not on your lists

comp(3208..4008)
DNA (801bp) protein (267aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_475_6
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4426..5736)
DNA (1311bp) protein (437aa)
Uncharacterized protein {ECO:0000313|EMBL:EYD74035.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrob
crystallin J1
scnpilot_expt_750_p_scaffold_475_7
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5820..7040)
DNA (1221bp) protein (407aa)
MFS transporter n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C7EC8
Arabinose efflux permease
Major Facilitator Superfamily protein {ECO:0000313|EMBL:AIL65414.1}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
scnpilot_expt_750_p_scaffold_475_8
unknown

Not on your lists

comp(7092..7370)
DNA (279bp) protein (93aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_475_9
Rickettsia rhipicephali, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7421..8206
DNA (786bp) protein (262aa)
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1105113
Prolipoprotein diacylglyceryl transferase n=1 Tax=Rickettsia rhipicephali (strain 3-7-female6-CWPP) RepID=H8KHA6_RICR3
scnpilot_expt_750_p_scaffold_475_10
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

8203..8817
DNA (615bp) protein (205aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
ribonuclease HII n=1 Tax=Fusobacterium russii RepID=UPI0003B4EA55
ribonuclease HII
scnpilot_expt_750_p_scaffold_475_11
unknown

Not on your lists

8917..9510
DNA (594bp) protein (198aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_475_12
unknown

Not on your lists

9522..10838
DNA (1317bp) protein (439aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_475_13
Candidatus Neoehrlichia lotoris, Candidatus Neoehrlichia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10849..12588)
DNA (1740bp) protein (580aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:KJV69428.1}; EC=3.1.-.- {ECO:0000313|EMBL:KJV69428.1};; TaxID=1359163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsia
recJ; Single-stranded-DNA-specific exonuclease recJ (EC:3.1.-.-) rbh
UPI0003D66B4A related cluster n=1 Tax=unknown RepID=UPI0003D66B4A
scnpilot_expt_750_p_scaffold_475_14
endosymbiont of Acanthamoeba sp. UWC8, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12592..13653)
DNA (1062bp) protein (354aa)
Transporter YjgP/YjgQ n=1 Tax=Commensalibacter intestini A911 RepID=G6EXR6_9PROT
putative permease
Putative permease {ECO:0000313|EMBL:AIF80633.1}; TaxID=86106 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae.;" source="endosymbiont of Acanthamoeba sp. UWC8.;"
scnpilot_expt_750_p_scaffold_475_15
R_Alphaproteobacteria_40_19, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13659..14222)
DNA (564bp) protein (188aa)
Peptidase M15D, vanX D-ala-D-ala dipeptidase; K08641 D-alanyl-D-alanine dipeptidase [EC:3.4.13.22] Tax=RIFCSPLOWO2_02_FULL_Alphaproteobacteria_40_19_curated
ddpX; D-alanyl-D-alanine dipeptidase (EC:3.4.13.22)
hypothetical protein n=1 Tax=Endozoicomonas elysicola RepID=UPI00037E4725
scnpilot_expt_750_p_scaffold_475_16
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14311..15450
DNA (1140bp) protein (380aa)
cotSA; Spore coat protein SA (EC:2.4.-.-)
GT1 family glycosyltransferase {ECO:0000313|EMBL:AIL65243.1}; EC=2.4.-.- {ECO:0000313|EMBL:AIL65243.1};; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="
Glycosyltransferase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RE26_9PROT rbh
scnpilot_expt_750_p_scaffold_475_17
Rickettsia monacensis, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15452..16246
DNA (795bp) protein (265aa)
Transferase 2, rSAM/selenodomain-associated n=1 Tax=Rickettsia monacensis IrR/Munich RepID=U6EHX8_9RICK
Glycosyl transferase family 2
Glycosyl transferase family 2 {ECO:0000313|EMBL:CEO16481.1}; TaxID=109232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever
scnpilot_expt_750_p_scaffold_475_18
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16331..17311
DNA (981bp) protein (327aa)
mdh_1; Malate dehydrogenase (EC:1.1.1.37) rbh
Malate dehydrogenase {ECO:0000313|EMBL:AIL64834.1}; EC=1.1.1.37 {ECO:0000313|EMBL:AIL64834.1};; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsi
Malate dehydrogenase 2 n=1 Tax=Aquifex aeolicus (strain VF5) RepID=MDH2_AQUAE
scnpilot_expt_750_p_scaffold_475_19
unknown

Not on your lists

17329..17994
DNA (666bp) protein (222aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_475_20
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18061..18918
DNA (858bp) protein (286aa)
flagellar motor protein MotA n=1 Tax=Woodsholea maritima RepID=UPI0003621C57
MotA/TolQ/Exbb proton channel
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:ADG12037.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter
scnpilot_expt_750_p_scaffold_475_21
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18971..21568)
DNA (2598bp) protein (866aa)
preprotein translocase subunit SecA n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B4DE
secA; preprotein translocase subunit SecA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirilla
scnpilot_expt_750_p_scaffold_475_22
unknown

Not on your lists

21599..22561
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Rickettsiaceae bacterium Os18 RepID=UPI00037B17EA
PpiC-type peptidyl-prolyl cis-trans isomerase
scnpilot_expt_750_p_scaffold_475_23
unknown

Not on your lists

22581..23201
DNA (621bp) protein (207aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_475_24
Sulfurimonas autotrophica, Sulfurimonas, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

23274..24527
DNA (1254bp) protein (418aa)
NLP/P60 protein n=1 Tax=Sulfurimonas autotrophica (strain ATCC BAA-671 / DSM 16294 / JCM 11897 / OK10) RepID=E0UT13_SULAO
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:ADN09254.1}; Flags: Precursor;; TaxID=563040 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfurimonas.;" source="S
scnpilot_expt_750_p_scaffold_475_25
unknown

Not on your lists

24974..25267
DNA (294bp) protein (98aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_475_26
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25264..25629
DNA (366bp) protein (122aa)
Response regulator receiver protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I696_RHOVT
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ADP71761.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodom
scnpilot_expt_750_p_scaffold_475_27
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25640..27742
DNA (2103bp) protein (701aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillacea
Chemotaxis protein cheA n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EY67_9PROT rbh
cheA; Chemotaxis protein cheA
scnpilot_expt_750_p_scaffold_475_28
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27744..28238
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036B7F38
cheW; chemotaxis protein CheW
Chemotaxis protein cheW {ECO:0000313|EMBL:CCD85467.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
scnpilot_expt_750_p_scaffold_475_29
Pseudoalteromonas luteoviolacea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28248..30647
DNA (2400bp) protein (800aa)
Methyl-accepting chemotaxis protein n=1 Tax=Pseudoalteromonas luteoviolacea 2ta16 RepID=V4HVA6_9GAMM
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:ESP91859.1}; TaxID=1353533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" s
aer2; aerotaxis transducer
scnpilot_expt_750_p_scaffold_475_30
Pseudoalteromonas luteoviolacea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30672..31499
DNA (828bp) protein (276aa)
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=1268239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadale
Chemotaxis protein methyltransferase n=1 Tax=Pseudoalteromonas luteoviolacea B = ATCC 29581 RepID=L8D8S4_9GAMM
MCP methyltransferase, CheR-type
Displaying items 1-30 of 62 in total

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