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scnpilot_expt_750_p_scaffold_731

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_731_1
unknown

Not on your lists

222..1214
DNA (993bp) protein (331aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_731_2
Holospora obtusa, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1242..1961)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Holospora obtusa RepID=UPI0003AEC393
Putative dienelactone hydrolase {ECO:0000313|EMBL:ETZ07275.1}; TaxID=1399147 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora obtusa
esterase
scnpilot_expt_750_p_scaffold_731_3
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2034..2507)
DNA (474bp) protein (158aa)
Peptidoglycan-associated lipoprotein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HV04_PARL1
omp; outer membrane lipoprotein of the Pal-Tol system Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
peptidoglycan-associated lipoprotein
scnpilot_expt_750_p_scaffold_731_4
R_Gammaproteobacteria_45_12, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2737..3744)
DNA (1008bp) protein (336aa)
GDP-6-deoxy-D-lyxo-4-hexulose reductase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_45_12_curated
Putative GDP-mannose 4,6-dehydratase n=1 Tax=Eubacterium yurii subsp. margaretiae ATCC 43715 RepID=E0QJ75_9FIRM rbh
GDP-mannose 4,6-dehydratase
scnpilot_expt_750_p_scaffold_731_5
R_Gammaproteobacteria_45_12, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3890..4849
DNA (960bp) protein (320aa)
putative pyruvate dehydrogenase E1 component subunit alpha; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_45_12_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BCW8_9BACT rbh
putative pyruvate dehydrogenase E1 component subunit alpha
scnpilot_expt_750_p_scaffold_731_6
R_Gammaproteobacteria_43_28, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4830..5939
DNA (1110bp) protein (370aa)
putative pyruvate dehydrogenase E1 component subunit beta; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_43_28_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BBA9_9BACT rbh
putative pyruvate dehydrogenase E1 component subunit beta
scnpilot_expt_750_p_scaffold_731_7
R_Gammaproteobacteria_37_14, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5945..6811
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Bacteroides gallinarum RepID=UPI000376A73D
glycosyl transferase family protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_37_14_curated
glycosyltransferase like 2 family protein
scnpilot_expt_750_p_scaffold_731_8
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

6878..7630
DNA (753bp) protein (251aa)
Carbonic anhydrase n=1 Tax=Rivularia sp. PCC 7116 RepID=K9RLW0_9CYAN
carbonic anhydrase
Carbonic anhydrase {ECO:0000313|EMBL:AFY58082.1}; Flags: Precursor;; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
scnpilot_expt_750_p_scaffold_731_9
unknown

Not on your lists

comp(7649..8623)
DNA (975bp) protein (325aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_731_10
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8744..9445)
DNA (702bp) protein (234aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=uncultured bacterium RepID=K2AQG2_9BACT
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:KGE87923.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactyli
3-oxoacyl-ACP reductase
scnpilot_expt_750_p_scaffold_731_11
R_Gammaproteobacteria_42_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9438..10451)
DNA (1014bp) protein (338aa)
putative GDP-L-fucose synthase; K02377 GDP-L-fucose synthase [EC:1.1.1.271] Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_42_13_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2C7J2_9BACT rbh
NAD-dependent epimerase/dehydratase
scnpilot_expt_750_p_scaffold_731_12

Not on your lists

comp(10438..11424)
DNA (987bp) protein (329aa)
fcl; GDP-L-fucose synthetase (EC:1.1.1.271)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BND3_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD70273.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_expt_750_p_scaffold_731_13

Not on your lists

comp(11434..12741)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B8A7_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD70272.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative aminotransferase [DegT/DnrJ/EryC1/StrS domain]
scnpilot_expt_750_p_scaffold_731_14
R_Gammaproteobacteria_41_20, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12834..13772
DNA (939bp) protein (313aa)
NAD-dependent epimerase/dehydratase; K02377 GDP-L-fucose synthase [EC:1.1.1.271] Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_41_20_curated
GDP-L-fucose synthase n=1 Tax=uncultured bacterium RepID=K2ATH1_9BACT rbh
wcaG; nucleoside-diphosphate-sugar epimerase
scnpilot_expt_750_p_scaffold_731_15
R_Alphaproteobacteria_40_19, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13775..14686)
DNA (912bp) protein (304aa)
Tyrosine recombinase XerC n=3 Tax=Rickettsia typhi RepID=H8NJ80_RICTP
xerD; tyrosine recombinase xerD; K04763 integrase/recombinase XerD Tax=RIFCSPLOWO2_02_FULL_Alphaproteobacteria_40_19_curated
xerD; site-specific tyrosine recombinase XerD
scnpilot_expt_750_p_scaffold_731_16
unknown

Not on your lists

comp(14670..14822)
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_731_17
Parvularcula bermudensis, Parvularcula, Parvularculales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14898..15443
DNA (546bp) protein (182aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=314260 species="Bacteria; Proteobacteria; Alphapr
Shikimate kinase n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0TB43_PARBH
shikimate kinase
scnpilot_expt_750_p_scaffold_731_18
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15430..16485
DNA (1056bp) protein (352aa)
aroB; 3-dehydroquinate synthase AroB (EC:4.2.3.4) Tax=GWF2_Bacteroidetes_33_38_curated
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase id=4022237 bin=GWF2_Bacteroidetes_33_38 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
scnpilot_expt_750_p_scaffold_731_19
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16698..17972
DNA (1275bp) protein (425aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
tig; trigger factor (EC:5.2.1.8)
Trigger factor n=1 Tax=Acetobacter sp. CAG:267 RepID=R5XRX2_9PROT
scnpilot_expt_750_p_scaffold_731_20
Ehrlichia canis, Ehrlichia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18025..18648
DNA (624bp) protein (208aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92) rbh
ATP-dependent Clp protease proteolytic subunit {ECO:0000255|HAMAP-Rule:MF_00444}; EC=3.4.21.92 {ECO:0000255|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000255|HAMAP-Rule:MF_00444}; TaxID=269484 spe
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ehrlichia canis (strain Jake) RepID=CLPP_EHRCJ rbh
scnpilot_expt_750_p_scaffold_731_21
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18863..20140
DNA (1278bp) protein (426aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Asticcacaulis sp. YBE204 RepID=V4NLY3_9CAUL
clpX; ATP-dependent Clp protease ATP-binding subunit clpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
ATP-dependent clp protease, ATP-binding subunit clpx
scnpilot_expt_750_p_scaffold_731_22
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20262..22721
DNA (2460bp) protein (820aa)
ATP-dependent protease La Type I (EC:3.4.21.53)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
Lon protease n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0TBF5_PARBH
scnpilot_expt_750_p_scaffold_731_23
Wolbachia sp. wRi, Wolbachia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22864..24291)
DNA (1428bp) protein (476aa)
Putative amino acid/peptide transporter n=3 Tax=Wolbachia RepID=C0R5U8_WOLWR
putative amino acid/peptide transporter
Putative amino acid/peptide transporter {ECO:0000313|EMBL:ACN95140.1}; TaxID=66084 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Anaplasmataceae; Wolbachieae; Wolbachia.;" sou
scnpilot_expt_750_p_scaffold_731_24
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24715..25608
DNA (894bp) protein (298aa)
plasmid partitioning protein RepA
Chromosome partitioning protein MipZ {ECO:0000313|EMBL:AIL66042.1}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
ATPase MipZ id=2439459 bin=GWA1_Alphaproteobacteria_45_9 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA1_Alphaproteobacteria_45_9 organism_group=Alphaproteobacteria organism_desc=Good marker genes; small
scnpilot_expt_750_p_scaffold_731_25
Wolbachia endosymbiont of Cimex lectularius, Wolbachia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25609..26100
DNA (492bp) protein (164aa)
molecular chaperone DnaJ n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002F9F134
dnaJ; DnaJ domain protein
DnaJ domain protein {ECO:0000313|EMBL:BAO99841.1}; TaxID=246273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Anaplasmataceae; Wolbachieae; Wolbachia.;" source="Wolbachia endo
scnpilot_expt_750_p_scaffold_731_26
unknown

Not on your lists

26179..26418
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_731_27
R_Chlamydiae_45_22, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

26525..27445
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EGQ0_9BACT
integral membrane protein; K15270 S-adenosylmethionine uptake transporter Tax=RIFCSPLOWO2_02_FULL_Chlamydiae_45_22_curated
S-adenosylmethionine uptake transporter
scnpilot_expt_750_p_scaffold_731_28

Not on your lists

27453..28361
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EGQ0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE08772.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
multidrug transporter
scnpilot_expt_750_p_scaffold_731_29
unknown

Not on your lists

28409..28807
DNA (399bp) protein (133aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_731_30
Ehrlichia canis, Ehrlichia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28827..29177)
DNA (351bp) protein (117aa)
Transcriptional regulator, MerR family n=1 Tax=Ehrlichia canis (strain Jake) RepID=Q3YSZ6_EHRCJ
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:AAZ68159.1}; TaxID=269484 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Anaplasmataceae; Ehrlichia.;" source="Ehrlichi
Displaying items 1-30 of 42 in total

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