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scnpilot_expt_750_p_scaffold_1038

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_1038_1
RHI_Legionellales_35_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1437..1967
DNA (531bp) protein (177aa)
DNA topology modulation protein n=2 Tax=Legionellaceae RepID=I7I3Z3_LEGPN
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Legionellales_35_11_curated
DNA topology modulation protein
scnpilot_expt_750_p_scaffold_1038_2
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

2422..3480
DNA (1059bp) protein (353aa)
Ankyrin repeat protein, putative n=1 Tax=Trichomonas vaginalis RepID=A2DXB5_TRIVA
Ankyrin repeat protein, putative {ECO:0000313|EMBL:EAX89549.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
pfs, nacht and ankyrin domain protein
scnpilot_expt_750_p_scaffold_1038_3
Holospora obtusa, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3558..4172
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Holospora obtusa RepID=UPI0003AEF84D
Putative amino acid efflux protein YcgF {ECO:0000313|EMBL:ETZ07371.1}; TaxID=1399147 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospor
Lysine exporter protein (LYSE/YGGA)
scnpilot_expt_750_p_scaffold_1038_4
Buchnera aphidicola, Buchnera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4169..4885)
DNA (717bp) protein (239aa)
Zinc import ATP-binding protein ZnuC {ECO:0000255|HAMAP-Rule:MF_01725}; EC=3.6.3.- {ECO:0000255|HAMAP-Rule:MF_01725};; TaxID=224915 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacter
Zinc import ATP-binding protein ZnuC n=1 Tax=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) RepID=ZNUC_BUCBP
znuC; high-affinity zinc uptake system ATP-binding protein ZnuC
scnpilot_expt_750_p_scaffold_1038_5
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

4890..5705
DNA (816bp) protein (272aa)
Periplasmic solute binding protein n=1 Tax=Ehrlichia canis (strain Jake) RepID=Q3YSL0_EHRCJ
periplasmic solute binding protein
ABC transporter substrate binding protein; K09815 zinc transport system substrate-binding protein Tax=CG_Magasa_01
scnpilot_expt_750_p_scaffold_1038_6
unknown

Not on your lists

5698..6198
DNA (501bp) protein (167aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1038_7
Rickettsiales bacterium SCGC AAA041-L04, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6222..6509
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Neorickettsia sennetsu (strain Miyayama) RepID=Q2GCJ4_NEOSM
Uncharacterized protein {ECO:0000313|EMBL:KKB96364.1}; TaxID=1607817 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium SCGC AAA041-L04.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1038_8

Not on your lists

6590..8287
DNA (1698bp) protein (566aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=77133 species="Bacteria; environmental
dnaG; DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=uncultured bacterium RepID=K2EGU3_9BACT
scnpilot_expt_750_p_scaffold_1038_9
endosymbiont of Acanthamoeba sp. UWC36, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8329..10851
DNA (2523bp) protein (841aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02005, ECO:0000256|SAAS:SAAS00105779}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02005, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Rickettsia rhipicephali (strain 3-7-female6-CWPP) RepID=H8KIF1_RICR3 rbh
scnpilot_expt_750_p_scaffold_1038_10
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10914..11789
DNA (876bp) protein (292aa)
Drug/metabolite transporter superfamily permease n=1 Tax=Oceanibaculum indicum P24 RepID=K2KF65_9PROT
Drug/metabolite transporter superfamily permease {ECO:0000313|EMBL:EKE76015.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum
putative permease of the drug/metabolite transporter superfamily
scnpilot_expt_750_p_scaffold_1038_11
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11786..12511
DNA (726bp) protein (242aa)
flagellar biosynthesis protein FliP n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B5DF81
fliP; Flagellar biosynthetic protein fliP precursor rbh
Flagellar biosynthetic protein fliP {ECO:0000313|EMBL:AIL66115.1}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
scnpilot_expt_750_p_scaffold_1038_12
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12624..12914
DNA (291bp) protein (97aa)
Integration host factor subunit beta n=1 Tax=Rhodobacter sp. SW2 RepID=C8RWA0_9RHOB
ihfB; integration host factor subunit beta; K05788 integration host factor subunit beta Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
integration host factor subunit beta
scnpilot_expt_750_p_scaffold_1038_13
unknown

Not on your lists

comp(12965..13660)
DNA (696bp) protein (232aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1038_14
unknown

Not on your lists

13823..14272
DNA (450bp) protein (150aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1038_15
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14290..14706
DNA (417bp) protein (139aa)
nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.
nucleoside diphosphate kinase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DDA558
scnpilot_expt_750_p_scaffold_1038_16
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14996..15163
DNA (168bp) protein (56aa)
rpmG; Ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
50S ribosomal protein L33 id=4742449 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
scnpilot_expt_750_p_scaffold_1038_17
unknown

Not on your lists

comp(15216..16493)
DNA (1278bp) protein (426aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1038_18
Thermosipho africanus, Thermosipho, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

16608..17063
DNA (456bp) protein (152aa)
Ribose 5-phosphate isomerase B n=2 Tax=Thermosipho africanus RepID=B7IDC9_THEAB
rpiB; ribose 5-phosphate isomerase B
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:ACJ76006.1}; TaxID=484019 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Thermosipho.;" source="Thermosipho africanus (strain TCF5
scnpilot_expt_750_p_scaffold_1038_19
Roseobacter sp. GAI101, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17060..18337
DNA (1278bp) protein (426aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Roseobacter sp. GAI101 RepID=B7RN13_9RHOB
scnpilot_expt_750_p_scaffold_1038_20
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18363..20426
DNA (2064bp) protein (688aa)
ptrB; Protease 2 (EC:3.4.21.83)
Protease 2 {ECO:0000313|EMBL:AIL64912.1}; EC=3.4.21.83 {ECO:0000313|EMBL:AIL64912.1};; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bact
Protease II n=1 Tax=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) RepID=Q4UMB2_RICFE rbh
scnpilot_expt_750_p_scaffold_1038_21
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20521..21615
DNA (1095bp) protein (365aa)
Ammonium transporter n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VEJ9_9PROT rbh
Ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=349215 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus EPB.;"
scnpilot_expt_750_p_scaffold_1038_22
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21823..22854
DNA (1032bp) protein (344aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TX42_TISMK rbh
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AFK57330.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" so
scnpilot_expt_750_p_scaffold_1038_23
R_Gammaproteobacteria_45_12, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22851..24161)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B9S1_9BACT
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_45_12_curated
scnpilot_expt_750_p_scaffold_1038_24
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24359..25288
DNA (930bp) protein (310aa)
Type II/III secretion system protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C324_HYPNA
Flp pilus assembly protein, secretin CpaC
Flp pilus assembly protein, secretin CpaC {ECO:0000313|EMBL:AIL65161.1}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
scnpilot_expt_750_p_scaffold_1038_25
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25444..25863
DNA (420bp) protein (140aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Pelagibacter sp. (strain IMCC9063) RepID=F2I313_PELSM
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959};
cytochrome c-type biogenesis protein CcmE, heme chaperone
scnpilot_expt_750_p_scaffold_1038_26
CG_Verruco_01, Verrucomicrobia, Bacteria

Not on your lists

25942..26793
DNA (852bp) protein (284aa)
S-adenosylmethionine transporter n=2 Tax=Rickettsia canadensis RepID=A8EXE4_RICCK
sam; S-adenosylmethionine transporter; K15270 S-adenosylmethionine uptake transporter Tax=CG_Verruco_01
S-adenosylmethionine transporter
scnpilot_expt_750_p_scaffold_1038_27
CG_Mariprof_02, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26795..27268
DNA (474bp) protein (158aa)
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23] Tax=CG_Mariprof_02
deoxyuridine 5''''-triphosphate nucleotidohydrolase n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI0003777D51
deoxyuridine 5'-triphosphate nucleotidohydrolase
scnpilot_expt_750_p_scaffold_1038_28
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27269..27658
DNA (390bp) protein (130aa)
Preprotein translocase, YajC subunit n=1 Tax=Roseobacter sp. GAI101 RepID=B7RQ94_9RHOB
Preprotein translocase subunit YajC {ECO:0000313|EMBL:KHQ52105.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponti
yajC; preprotein translocase, YajC subunit
scnpilot_expt_750_p_scaffold_1038_29
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27668..29197
DNA (1530bp) protein (510aa)
Protein translocase subunit SecD n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISM9_RHOCS
secD; preprotein translocase subunit SecD
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
scnpilot_expt_750_p_scaffold_1038_30
unknown

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29198..29548
DNA (351bp) protein (117aa)

This feature has no annotations

Displaying 30 items

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