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scnpilot_expt_750_p_scaffold_1167

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_1167_1
unknown

Not on your lists

comp(1..270)
DNA (270bp) protein (90aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1167_2
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(518..1912)
DNA (1395bp) protein (465aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodos
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2KK27_9PROT
scnpilot_expt_750_p_scaffold_1167_3
R_Alphaproteobacteria_40_19, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1931..3193)
DNA (1263bp) protein (421aa)
branched-chain alpha-keto acid dehydrogenase subunit E2; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] Tax=RIFCSPLOWO2_02_FULL_Alphaproteobacteria_40_19
pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (EC:2.3.1.12)
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Rickettsia bellii (strain RML369-C) RepID=ODP2_RICBR rbh
scnpilot_expt_750_p_scaffold_1167_4
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3214..4200)
DNA (987bp) protein (329aa)
Pyruvate dehydrogenase E1 component, beta subunit n=1 Tax=alpha proteobacterium BAL199 RepID=A8TL70_9PROT
Pyruvate dehydrogenase E1 component, beta subunit {ECO:0000313|EMBL:EDP66408.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
pdhB; pyruvate dehydrogenase E1 component subunit beta
scnpilot_expt_750_p_scaffold_1167_5
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4219..5205)
DNA (987bp) protein (329aa)
pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rho
pyruvate dehydrogenase E1 subunit alpha n=1 Tax=Hirschia maritima RepID=UPI000366B11C
scnpilot_expt_750_p_scaffold_1167_6
GWF2_Alphaproteobacteria_58_20_curated, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5282..6001
DNA (720bp) protein (240aa)
hypothetical protein Tax=GWF2_Alphaproteobacteria_58_20_curated
Putative uncharacterized protein id=3850385 bin=GWC2_Alphaproteobacteria_42_16 species=Rhizobium etli genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
prepilin-type N-terminal cleavage/methylation domain-containing protein
scnpilot_expt_750_p_scaffold_1167_7
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6004..8139
DNA (2136bp) protein (712aa)
Flagellar biosynthesis protein FlhA n=1 Tax=Oceanibaculum indicum P24 RepID=K2J6H3_9PROT
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:EKE70532.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="O
flhA; flagellar biosynthesis protein FlhA
scnpilot_expt_750_p_scaffold_1167_8
unknown

Not on your lists

8139..10061
DNA (1923bp) protein (641aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1167_9
Rickettsia bellii, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10067..11353
DNA (1287bp) protein (429aa)
folC; folylpolyglutamate synthase (EC:6.3.2.17)
Folylpolyglutamate synthase {ECO:0000313|EMBL:ABE05283.1}; EC=6.3.2.17 {ECO:0000313|EMBL:ABE05283.1};; TaxID=336407 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiacea
Folylpolyglutamate synthase n=1 Tax=Rickettsia bellii (strain RML369-C) RepID=Q1RH81_RICBR rbh
scnpilot_expt_750_p_scaffold_1167_10
unknown

Not on your lists

11366..11482
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1167_11
Photorhabdus temperata, Photorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11595..11810
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Photorhabdus temperata J3 RepID=U7QZV3_PHOTE
Uncharacterized protein {ECO:0000313|EMBL:ERT13599.1}; TaxID=1389415 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Photorhabdus.;" source="Photorhabdus
scnpilot_expt_750_p_scaffold_1167_12
alpha proteobacterium IMCC14465, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12138..12524)
DNA (387bp) protein (129aa)
50S ribosomal protein L17 (EC:1.17.4.2)
50S ribosomal protein L17 n=1 Tax=alpha proteobacterium IMCC14465 RepID=J9DY72_9PROT
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1220535 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium IMCC14
scnpilot_expt_750_p_scaffold_1167_13
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12540..13562)
DNA (1023bp) protein (341aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SSJ3_RHOPH
scnpilot_expt_750_p_scaffold_1167_14
RBG_13_Deltaproteobacteria_49_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13607..13996)
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=RS11_ROSCS
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RBG_13_Deltaproteobacteria_49_15_curated
30S ribosomal protein S11
scnpilot_expt_750_p_scaffold_1167_15
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14006..14374)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=RS13_METSB
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella si
scnpilot_expt_750_p_scaffold_1167_16
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14481..15146)
DNA (666bp) protein (222aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6QVB9_9FIRM
adk; adenylate kinase
scnpilot_expt_750_p_scaffold_1167_17
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15163..16503)
DNA (1341bp) protein (447aa)
Protein translocase subunit SecY n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ANK5_AZOBR
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
preprotein translocase subunit SecY
scnpilot_expt_750_p_scaffold_1167_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16521..16973)
DNA (453bp) protein (151aa)
50S ribosomal protein L15 n=1 Tax=alpha proteobacterium SCGC AAA158-B04 RepID=UPI0003627B72
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
rplO; 50S ribosomal protein L15
scnpilot_expt_750_p_scaffold_1167_19
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16990..17199)
DNA (210bp) protein (70aa)
50S ribosomal protein L30 n=2 Tax=Rhodospirillum rubrum RepID=RL30_RHORT
rpmD; Ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
rpmD; 50S ribosomal protein L30
scnpilot_expt_750_p_scaffold_1167_20
Rickettsiales bacterium SCGC AAA041-L04, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17202..17744)
DNA (543bp) protein (181aa)
30S ribosomal protein S5 n=1 Tax=alpha proteobacterium SCGC AAA160-J14 RepID=UPI000367FE34
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307}; TaxID=1607817 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium SCGC AAA041-L04.;"
rpsE; Ribosomal protein S5
scnpilot_expt_750_p_scaffold_1167_21
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17761..18126)
DNA (366bp) protein (122aa)
50S ribosomal protein L18 n=2 Tax=Rhodospirillum rubrum RepID=RL18_RHORT
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000255|HAMAP-Rule:MF_01337}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodosp
scnpilot_expt_750_p_scaffold_1167_22
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18142..18702)
DNA (561bp) protein (187aa)
50S ribosomal protein L6 n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TNW7_TISMK
rplF; 50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Ti
scnpilot_expt_750_p_scaffold_1167_23
Acetobacter sp. CAG:977, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18712..19101)
DNA (390bp) protein (130aa)
30S ribosomal protein S8 n=1 Tax=Acetobacter sp. CAG:977 RepID=R5PZA6_9PROT
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1262685 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples
30S ribosomal protein S8
scnpilot_expt_750_p_scaffold_1167_24
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(19122..19427)
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=2 Tax=Bradyrhizobium RepID=H0RX34_9BRAD
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobi
rpsN; 30S ribosomal protein S14
scnpilot_expt_750_p_scaffold_1167_25
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19440..19994)
DNA (555bp) protein (185aa)
50S ribosomal protein L5 n=1 Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0S0M6_BUTPB
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" sourc
scnpilot_expt_750_p_scaffold_1167_26
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20005..20352)
DNA (348bp) protein (116aa)
50S ribosomal protein L24 n=1 Tax=Nitratireductor indicus C115 RepID=K2PGT3_9RHIZ
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratire
rplX; 50S ribosomal protein L24
scnpilot_expt_750_p_scaffold_1167_27
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20354..20722)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZK3_9PROT
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.
scnpilot_expt_750_p_scaffold_1167_28
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20743..20976)
DNA (234bp) protein (78aa)
30S ribosomal protein S17 n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HYF9_9PROT
rpsQ; 30S ribosomal subunit protein S17 Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
rpsQ; 30S ribosomal protein S17
scnpilot_expt_750_p_scaffold_1167_29
Rickettsia bellii, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20969..21175)
DNA (207bp) protein (69aa)
50S ribosomal protein L29 n=2 Tax=Rickettsia bellii RepID=RL29_RICB8
rpmC; 50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1359194 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; belli group.
scnpilot_expt_750_p_scaffold_1167_30
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(21168..21593)
DNA (426bp) protein (142aa)
50S ribosomal protein L16 n=2 Tax=Candidatus Midichloria mitochondrii RepID=F7XUK7_MIDMI
rplP; Ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales
Displaying items 1-30 of 39 in total

View Taxonomy