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scnpilot_p_inoc_scaffold_926

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_926_1
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..731
DNA (729bp) protein (243aa)
CysE/LacA/LpxA/NodL family acetyltransferase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UTR3_PSEUP
CysE/LacA/LpxA/NodL family acetyltransferase
CysE/LacA/LpxA/NodL family acetyltransferase {ECO:0000313|EMBL:AER56166.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;
scnpilot_p_inoc_scaffold_926_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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935..2221
DNA (1287bp) protein (429aa)
putative flippase id=1283694 bin=GWE1_Burkholderiales_65_30 species=Pseudoalteromonas marina genus=Pseudoalteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
putative flippase Tax=GWE1_Burkholderiales_65_30_curated
polysaccharide biosynthesis protein
scnpilot_p_inoc_scaffold_926_3
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2235..3323
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EK07_METSB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACK49954.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestr
scnpilot_p_inoc_scaffold_926_4
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3363..4724
DNA (1362bp) protein (454aa)
Uncharacterized protein {ECO:0000313|EMBL:EZP80237.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_p_inoc_scaffold_926_5
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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4778..5866
DNA (1089bp) protein (363aa)
Group 1 glycosyl transferase n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0VJQ8_MYCVA rbh
Group 1 glycosyl transferase {ECO:0000313|EMBL:EJZ11334.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 259
group 1 glycosyl transferase
scnpilot_p_inoc_scaffold_926_6
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6048..6941
DNA (894bp) protein (298aa)
Predicted Rossmann fold nucleotide-binding protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WE77_9SPHN rbh
hypothetical protein; K06966 Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
hypothetical protein
scnpilot_p_inoc_scaffold_926_7
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7063..7812)
DNA (750bp) protein (250aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YLG6_9SPHN rbh
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase {ECO:0000313|EMBL:GAD49242.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosph
scnpilot_p_inoc_scaffold_926_8
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7877..8104)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C1N3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH42636.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
scnpilot_p_inoc_scaffold_926_9
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8104..9441)
DNA (1338bp) protein (446aa)
Phosphoglucosamine mutase {ECO:0000313|EMBL:AKH42635.1}; EC=5.4.2.10 {ECO:0000313|EMBL:AKH42635.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobact
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A3B2_9SPHN rbh
scnpilot_p_inoc_scaffold_926_10
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9480..10793
DNA (1314bp) protein (438aa)
Proton glutamate symport protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N851_ERYLH rbh
Proton glutamate symport protein {ECO:0000313|EMBL:AKH42634.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source
proton glutamate symport protein
scnpilot_p_inoc_scaffold_926_11
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10870..11475
DNA (606bp) protein (202aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonad
Superoxide dismutase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZV38_9SPHN rbh
superoxide dismutase
scnpilot_p_inoc_scaffold_926_12
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11518..12744)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PCW9_9SPHN rbh
Pheromone autoinducer 2 transporter {ECO:0000313|EMBL:AKH42628.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" sou
hypothetical protein
scnpilot_p_inoc_scaffold_926_13
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12802..13419)
DNA (618bp) protein (206aa)
RNA polymerase sigma70 n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD04FC rbh
RNA polymerase sigma70 {ECO:0000313|EMBL:KEO92378.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter l
RNA polymerase sigma-24 factor
scnpilot_p_inoc_scaffold_926_14
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13416..13637)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N854_ERYLH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC64137.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
scnpilot_p_inoc_scaffold_926_15
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13833..15482
DNA (1650bp) protein (550aa)
Blue-light-activated histidine kinase 1 {ECO:0000313|EMBL:AKH42625.1}; EC=2.7.13.3 {ECO:0000313|EMBL:AKH42625.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadale
signal transduction histidine kinase (EC:2.7.3.-)
Signal transduction histidine kinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GB38_NOVAD rbh
scnpilot_p_inoc_scaffold_926_16
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15510..16304)
DNA (795bp) protein (265aa)
Two-component response regulator n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PCX3_9SPHN rbh
Two-component response regulator {ECO:0000313|EMBL:KEO92381.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Eryth
two-component response regulator
scnpilot_p_inoc_scaffold_926_17
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16588..17751)
DNA (1164bp) protein (388aa)
UPI0003D64393 related cluster n=1 Tax=unknown RepID=UPI0003D64393
Uncharacterized protein {ECO:0000313|EMBL:ETI64057.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
hypothetical protein
scnpilot_p_inoc_scaffold_926_18
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17891..18976
DNA (1086bp) protein (362aa)
Fatty acid desaturase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IK07_9SPHN rbh
Fatty acid desaturase {ECO:0000313|EMBL:AKH42594.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altereryt
fatty acid desaturase
scnpilot_p_inoc_scaffold_926_19
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18984..20081)
DNA (1098bp) protein (366aa)
Putative permease n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y7R6_9SPHN rbh
Putative permease {ECO:0000313|EMBL:GAD49251.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium t
lipopolysaccharide export system permease
scnpilot_p_inoc_scaffold_926_20
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20071..21294)
DNA (1224bp) protein (408aa)
Predicted permease n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WE90_9SPHN rbh
Lipopolysaccharide export system permease protein LptF {ECO:0000313|EMBL:AKH42596.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altere
permease
scnpilot_p_inoc_scaffold_926_21
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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21446..22153
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LWA8_METRJ
Membrane protein {ECO:0000313|EMBL:EXL07873.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
scnpilot_p_inoc_scaffold_926_22

Not on your lists

comp(22213..22632)
DNA (420bp) protein (140aa)
ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=uncultured bacterium RepID=D6R6T8_9BACT
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_926_23
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22826..23641)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PCY3_9SPHN
Phasin protein {ECO:0000313|EMBL:AKH42598.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobact
phasin
scnpilot_p_inoc_scaffold_926_24
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23810..25717)
DNA (1908bp) protein (636aa)
Poly-beta-hydroxybutyrate polymerase {ECO:0000313|EMBL:AKH42599.1}; EC=2.3.1.- {ECO:0000313|EMBL:AKH42599.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; E
Putative poly-beta-hydroxybutyrate polymerase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKZ3_9SPHN rbh
poly-3-hydroxybutyrate synthase
scnpilot_p_inoc_scaffold_926_25
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25871..27070
DNA (1200bp) protein (400aa)
LL-diaminopimelate aminotransferase (EC:2.6.1.83)
Aminotransferase n=1 Tax=Sphingobium baderi LL03 RepID=T0GP00_9SPHN rbh
Aminotransferase {ECO:0000313|EMBL:EQB01733.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL0
scnpilot_p_inoc_scaffold_926_26
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27132..27944
DNA (813bp) protein (271aa)
enoyl-CoA hydratase (EC:4.2.1.17) Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
enoyl-CoA hydratase (EC:4.2.1.17)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002FE37CA rbh
scnpilot_p_inoc_scaffold_926_27
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28056..29456
DNA (1401bp) protein (467aa)
Putative aromatic acid transporter n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IK61_9SPHN rbh
4-hydroxybenzoate transporter PcaK {ECO:0000313|EMBL:AKH42601.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" sour
putative aromatic acid transporter rbh
scnpilot_p_inoc_scaffold_926_28
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29478..31133
DNA (1656bp) protein (552aa)
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:AKH42602.1}; EC=4.2.1.9 {ECO:0000313|EMBL:AKH42602.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobact
Dihydroxy-acid dehydratase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQH0_9SPHN
dihydroxy-acid dehydratase
scnpilot_p_inoc_scaffold_926_29
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(31151..31510)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMI0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR84422.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
scnpilot_p_inoc_scaffold_926_30
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31867..32046)
DNA (180bp) protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:AKH44055.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
Displaying items 1-30 of 33 in total

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