ggKbase home page

SCNpilot_expt_300_bf_scaffold_165

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_165_1
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(269..1129)
DNA (861bp) protein (287aa)
Beta-lactamase-like protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8D7_NITMU rbh
beta-lactamase-like protein
Beta-lactamase-like protein {ECO:0000313|EMBL:ABB74984.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira
SCNpilot_expt_300_bf_scaffold_165_2

Not on your lists

comp(1771..2673)
DNA (903bp) protein (301aa)
monophenol monooxygenase (EC:1.14.18.1)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00037D3673 rbh
Common central domain of tyrosinase {ECO:0000313|EMBL:AIA12573.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_expt_300_bf_scaffold_165_3

Not on your lists

comp(2670..3227)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000361F726
Uncharacterized protein {ECO:0000313|EMBL:AIA12574.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_165_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3873..4271)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6I4_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75637.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
SCNpilot_expt_300_bf_scaffold_165_5
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4552..8649)
DNA (4098bp) protein (1366aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHZ9_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU62142.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
peptidase C14
SCNpilot_expt_300_bf_scaffold_165_6
Synechococcus sp. WH 5701, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

8833..10818
DNA (1986bp) protein (662aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00035FDAF8 rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ75252.1}; TaxID=69042 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. WH 5701.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_165_7
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11106..12482
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUQ5_ACCPU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV36300.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).
SCNpilot_expt_300_bf_scaffold_165_8
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12479..16348
DNA (3870bp) protein (1290aa)
WD-40 repeat protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUQ4_ACCPU rbh
WD-40 repeat-containing protein
WD-40 repeat protein {ECO:0000313|EMBL:ACV36299.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_expt_300_bf_scaffold_165_9
unknown

Not on your lists

comp(16657..17049)
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_165_10
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18185..19012
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QK52_AZOSU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV25485.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain AT
SCNpilot_expt_300_bf_scaffold_165_11
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19113..19565)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI00035E175E
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_165_12
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19627..20367)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFZ2_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU62141.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
hypothetical protein
SCNpilot_expt_300_bf_scaffold_165_13
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20652..21770)
DNA (1119bp) protein (373aa)
ABC transport system, permease component YbhR n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJI6_9PROT rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira
ABC transporter
SCNpilot_expt_300_bf_scaffold_165_14
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21775..22917)
DNA (1143bp) protein (381aa)
ABC transport system, permease component YbhS n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJL2_9PROT rbh
Membrane protein {ECO:0000313|EMBL:KIO48256.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_165_15
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23082..24956)
DNA (1875bp) protein (625aa)
ABC transporter multidrug efflux pump, fused ATP-binding domains n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHU6_9PROT rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIO48161.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitro
ABC transporter-like protein
SCNpilot_expt_300_bf_scaffold_165_16
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24949..26031)
DNA (1083bp) protein (361aa)
Predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor protein YbhG n=1 Tax=Nitrosospira sp. APG3 RepID=M5DU62_9PROT rbh
Membrane protein {ECO:0000313|EMBL:KIO48257.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
secretion protein HlyD
SCNpilot_expt_300_bf_scaffold_165_17
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26061..26480)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK46_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48162.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
hypothetical protein
SCNpilot_expt_300_bf_scaffold_165_18
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26504..27382)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJK9_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:KIO48163.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
SCNpilot_expt_300_bf_scaffold_165_19
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27518..28699
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJI0_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU62914.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
hypothetical protein
SCNpilot_expt_300_bf_scaffold_165_20
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28986..29306
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJH4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48170.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
hypothetical protein
SCNpilot_expt_300_bf_scaffold_165_21
unknown

Not on your lists

comp(29375..29773)
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_165_22
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30472..30882)
DNA (411bp) protein (137aa)
Chain A, Red Copper Protein Nitrosocyanin n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHD1_9PROT
Nitrosocyanin {ECO:0000313|EMBL:KIO48503.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
chain A, red copper protein nitrosocyanin
SCNpilot_expt_300_bf_scaffold_165_23
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31371..31694
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI97_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62267.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
hypothetical protein
SCNpilot_expt_300_bf_scaffold_165_24
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32000..32440
DNA (441bp) protein (147aa)
guanine deaminase (EC:3.5.4.3)
Putative Guanine deaminase (Guanase) (Guanine aminase) (Guanine aminohydrolase) (GAH) (GDEase) {ECO:0000313|EMBL:CAL61070.1}; EC=3.5.4.3 {ECO:0000313|EMBL:CAL61070.1};; TaxID=204773 species="Bacteria;
Putative Guanine deaminase (Guanase) (Guanine aminase) (Guanine aminohydrolase) (GAH) (GDEase) n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3I3_HERAR
SCNpilot_expt_300_bf_scaffold_165_25
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32510..33049)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5DW38_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESS71561.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobul
SCNpilot_expt_300_bf_scaffold_165_26
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33842..34372)
DNA (531bp) protein (177aa)
GCN5-related N-acetyltransferase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BYU8_NITHN
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADE14161.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus
SCNpilot_expt_300_bf_scaffold_165_27
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34378..34563)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BYU7_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE14160.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophil
SCNpilot_expt_300_bf_scaffold_165_28
unknown

Not on your lists

35024..35575
DNA (552bp) protein (184aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_165_29
Endozoicomonas elysicola, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35630..36589)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Endozoicomonas elysicola RepID=UPI00036C5073 rbh
Uncharacterized protein {ECO:0000313|EMBL:KEI70779.1}; TaxID=305900 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas ely
hypothetical protein
SCNpilot_expt_300_bf_scaffold_165_30
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(36683..37147)
DNA (465bp) protein (155aa)
Uncharacterized protein n=4 Tax=Vibrio parahaemolyticus RepID=V7DJ05_VIBPH
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Displaying items 1-30 of 78 in total

View Taxonomy