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SCNpilot_cont_300_bf_scaffold_39

Search features with annotation key words

Displaying items 331-360 of 463 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_39_331
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

368430..371276
DNA (2847bp) protein (949aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PGG2_CHIPD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU59894.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
SCNpilot_cont_300_bf_scaffold_39_332
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

371329..371805
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037E7877
Uncharacterized protein {ECO:0000313|EMBL:GAO43500.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
Eukaryotic cytochrome b561
SCNpilot_cont_300_bf_scaffold_39_333
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

371920..372645
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003672060
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:AEV99259.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella
SCNpilot_cont_300_bf_scaffold_39_334
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

372972..374816
DNA (1845bp) protein (615aa)
Amidophosphoribosyltransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14] Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
amidophosphoribosyltransferase n=1 Tax=Segetibacter koreensis RepID=UPI000365BB91 rbh
amidophosphoribosyltransferase
SCNpilot_cont_300_bf_scaffold_39_335
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(374893..375750)
DNA (858bp) protein (286aa)
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Niabella soli DSM 19437 RepID=H1NPV4_9SPHI rbh
RNA polymerase sigma factor rpoD
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:AHF14910.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli
SCNpilot_cont_300_bf_scaffold_39_336
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

376343..378247
DNA (1905bp) protein (635aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KXK5_HALH1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE50376.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobact
SCNpilot_cont_300_bf_scaffold_39_337
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

378619..379797
DNA (1179bp) protein (393aa)
glutaryl-CoA dehydrogenase; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
acyl-CoA dehydrogenase n=1 Tax=Segetibacter koreensis RepID=UPI0003656A3F
acyl-CoA dehydrogenase
SCNpilot_cont_300_bf_scaffold_39_338
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

379953..380789
DNA (837bp) protein (279aa)
Contig179, whole genome shotgun sequence {ECO:0000313|EMBL:KIO74517.1}; EC=2.4.2.19 {ECO:0000313|EMBL:KIO74517.1};; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales
Nicotinate-nucleotide pyrophosphorylase (Carboxylating) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMR6_NIAKG rbh
nicotinate-nucleotide pyrophosphorylase
SCNpilot_cont_300_bf_scaffold_39_339
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

380805..381680
DNA (876bp) protein (292aa)
Diacylglycerol kinase catalytic region n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFY7_CHIPD
hypothetical protein Tax=CG_Bacteroid_01
diacylglycerol kinase catalytic subunit
SCNpilot_cont_300_bf_scaffold_39_340
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

381770..383431
DNA (1662bp) protein (554aa)
Carboxyl-terminal protease {ECO:0000313|EMBL:ACU63944.1}; EC=3.4.21.102 {ECO:0000313|EMBL:ACU63944.1};; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacte
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003749ED0 rbh
carboxyl-terminal protease
SCNpilot_cont_300_bf_scaffold_39_341
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(383384..383827)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000365C3A3
restriction endonuclease EcoRI subunit R
Restriction endonuclease EcoRI subunit R {ECO:0000313|EMBL:AKD54419.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotol
SCNpilot_cont_300_bf_scaffold_39_342
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

383999..384769
DNA (771bp) protein (257aa)
AMP nucleosidase; K01241 AMP nucleosidase [EC:3.2.2.4] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
AMP nucleosidase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICV1_FLUTR rbh
AMP nucleosidase
SCNpilot_cont_300_bf_scaffold_39_343
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(384761..386368)
DNA (1608bp) protein (536aa)
hypothetical protein n=1 Tax=Flavobacteriaceae bacterium P7-3-5 RepID=UPI00037C2553
Peptidase M1 {ECO:0000313|EMBL:KIC90150.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627
Peptidase M1 membrane alanine aminopeptidase
SCNpilot_cont_300_bf_scaffold_39_344
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(386496..387416)
DNA (921bp) protein (307aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytopha
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K527_9BACT
peptidylprolyl isomerase FKBP-type
SCNpilot_cont_300_bf_scaffold_39_345
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(387438..388436)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370D2E0 rbh
phosphoesterase RecJ domain-containing protein
phosphoesterase RecJ domain-containing protein; K06881 phosphoesterase RecJ domain-containing protein Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_300_bf_scaffold_39_346
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(388507..388911)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUX1_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU62880.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
SCNpilot_cont_300_bf_scaffold_39_347
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(388982..389758)
DNA (777bp) protein (259aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=485918 species="Bacteria; Bact
Diaminopimelate epimerase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKR5_CHIPD rbh
diaminopimelate epimerase
SCNpilot_cont_300_bf_scaffold_39_348
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

389852..391339
DNA (1488bp) protein (496aa)
amino acid permease n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0003067066 rbh
Amino acid transporter {ECO:0000313|EMBL:KIA88886.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium j
amino acid permease
SCNpilot_cont_300_bf_scaffold_39_349
unknown

Not on your lists

391858..392001
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_39_350
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

392172..392504
DNA (333bp) protein (111aa)
ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PM80_CHIPD
ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adaptor protein ClpS {ECO:0000313|EMBL:ACU63985.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" so
SCNpilot_cont_300_bf_scaffold_39_351
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(392518..393051)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Mesoflavibacter zeaxanthinifaciens RepID=UPI000255B6D5
Uncharacterized protein {ECO:0000313|EMBL:AKC17959.1}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psych
hypothetical protein
SCNpilot_cont_300_bf_scaffold_39_352
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(393096..393542)
DNA (447bp) protein (149aa)
Phenylacetic acid degradation-related protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EIP6_RUNSL
phenylacetic acid degradation-like protein
Phenylacetic acid degradation-related protein {ECO:0000313|EMBL:AEI47288.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyfo
SCNpilot_cont_300_bf_scaffold_39_353
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

393636..394592
DNA (957bp) protein (319aa)
Transcriptional regulator, LysR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL05_CHIPD rbh
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACU63915.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chi
SCNpilot_cont_300_bf_scaffold_39_354
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(394809..395201)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FSG8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI94158.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
ATPase
SCNpilot_cont_300_bf_scaffold_39_355
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

395305..397758
DNA (2454bp) protein (818aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEJ3_CHIPD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU57815.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
SCNpilot_cont_300_bf_scaffold_39_356
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

397755..398789
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEJ2_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU57814.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
SCNpilot_cont_300_bf_scaffold_39_357
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(398891..399757)
DNA (867bp) protein (289aa)
Sec-independent protein translocase protein TatC n=1 Tax=Niabella soli DSM 19437 RepID=H1NRB9_9SPHI
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibac
preprotein translocase subunit TatC
SCNpilot_cont_300_bf_scaffold_39_358
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(399789..400241)
DNA (453bp) protein (151aa)
ribose 5-phosphate isomerase n=1 Tax=Niabella aurantiaca RepID=UPI00037C6E51
RpiB/LacA/LacB family sugar-phosphate isomerase
Sugar-phosphate isomerase, RpiB/LacA/LacB family {ECO:0000313|EMBL:ACU58517.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" s
SCNpilot_cont_300_bf_scaffold_39_359
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(400525..402294)
DNA (1770bp) protein (590aa)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AEV96531.1}; EC=6.1.1.12 {ECO:0000313|EMBL:AEV96531.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagacea
Aspartate--tRNA ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK97_NIAKG rbh
aspartyl-tRNA synthetase
SCNpilot_cont_300_bf_scaffold_39_360
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(402460..403188)
DNA (729bp) protein (243aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAX8_CHIPD rbh
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACU59350.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Ch
Displaying items 331-360 of 463 in total

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