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SCNpilot_cont_300_bf_scaffold_39_335

Organism: SCNPILOT_CONT_300_BF_Bacteroidetes_43_15

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(374893..375750)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Niabella soli DSM 19437 RepID=H1NPV4_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 90.2
  • Coverage: 285.0
  • Bit_score: 506
  • Evalue 2.00e-140
  • rbh
RNA polymerase sigma factor rpoD similarity KEGG
DB: KEGG
  • Identity: 90.2
  • Coverage: 285.0
  • Bit_score: 506
  • Evalue 5.70e-141
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:AHF14910.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 285.0
  • Bit_score: 506
  • Evalue 2.90e-140

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Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 858
ATGAGACAGCTCAAGATAGCTACCCAGATTACCAATCGCGATTCCCAGGCAGTAGAGAAGTATTTGCAGGAGATTAGCCGTATTTCGATGATTACGCCTGAAGAAGAAACCATTTTAGCACAAAAGATCCACATGGGTGATCAGCGTGCTTTGGAAAAATTGGTTAAAGCTAACTTGCGTTTCGTGGTTTCTGTAGCTAAGCAATATCAGCACCAAGGTTTATCATTGAGTGATTTGATTAATGAAGGGAATTTAGGATTGATTAAGGCTGCACAAAGATTTGATGAAACTAAAGGGTTTAAATTCATTTCTTATGCCGTTTGGTGGATTCGTCAAAGTATTTTGCAGGCATTGGCCGAGCAAGGCCGCCTGGTGCGTTTGCCTCAGAATAAGATCGGTACTTATAACAAGGCCAATAAAGCATATATCGCATTTGAACAAGAGCATGAGCGCGAGCCAAGCACAGAAGAGCTGGCCTCTATTCTTGAAATGAGCGAAACAGAGATTGCCAACATTTTCAGCAGCAACAGCCGTCATACCTCTTTGGATGCACCGGTGCATGAAGCAGAAGATGTAGCTATGGGCGATTTACTGGAAGGCAGCAGCGATACAGATGATGATGTGATGAAAGACTCTTTGAAAGCAGAGATTCAACGCATCCTTAAATCTTTAAGCGTTCGTGAAGCGGAGATCATCTCTTCTTACTTCGGCCTGGAAGGCGATAATGGTCCTACCATCGAAGAGATCGGTAAAAAGTATGACCTTACCAAAGAGCGTATCCGCCAGATCAAAGAGAGAGCCATCAAACGCCTGCAGAAAGCGCGTTACAGCGGTTCCCTGAAATCTTATCTGGGTTAA
PROTEIN sequence
Length: 286
MRQLKIATQITNRDSQAVEKYLQEISRISMITPEEETILAQKIHMGDQRALEKLVKANLRFVVSVAKQYQHQGLSLSDLINEGNLGLIKAAQRFDETKGFKFISYAVWWIRQSILQALAEQGRLVRLPQNKIGTYNKANKAYIAFEQEHEREPSTEELASILEMSETEIANIFSSNSRHTSLDAPVHEAEDVAMGDLLEGSSDTDDDVMKDSLKAEIQRILKSLSVREAEIISSYFGLEGDNGPTIEEIGKKYDLTKERIRQIKERAIKRLQKARYSGSLKSYLG*