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SCNpilot_cont_300_bf_scaffold_151

Search features with annotation key words

Displaying items 1-30 of 192 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_151_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(226..693)
DNA (468bp) protein (156aa)
30S ribosomal protein S7 n=1 Tax=Niabella aurantiaca RepID=UPI00035F4F68
30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM
SCNpilot_cont_300_bf_scaffold_151_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(772..1152)
DNA (381bp) protein (127aa)
30S ribosomal protein S12 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU62_CHIPD
30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chiti
SCNpilot_cont_300_bf_scaffold_151_3
unknown

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2088..2312
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_151_4
unknown

Not on your lists

comp(2384..3508)
DNA (1125bp) protein (375aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_151_5
unknown

Not on your lists

comp(3515..4183)
DNA (669bp) protein (223aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_151_6
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4180..4734)
DNA (555bp) protein (185aa)
WGS project CAIT00000000 data, contig 9 n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GN95_9BACT
WGS project CAIT00000000 data, contig 9 {ECO:0000313|EMBL:CCH55373.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ
sigma-70 family RNA polymerase sigma factor
SCNpilot_cont_300_bf_scaffold_151_7
unknown

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comp(4840..5700)
DNA (861bp) protein (287aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_151_8
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5834..7456)
DNA (1623bp) protein (541aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036F82F0
Putative ggdef family protein {ECO:0000313|EMBL:EAY24283.1}; Flags: Fragment;; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscill
hypothetical protein
SCNpilot_cont_300_bf_scaffold_151_9
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7551..8252)
DNA (702bp) protein (234aa)
MORN repeat protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YYD7_AEQSU
hypothetical protein Tax=GWA2_Bacteroidetes_31_9b_curated
MORN repeat protein
SCNpilot_cont_300_bf_scaffold_151_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8333..9754
DNA (1422bp) protein (474aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000380BADC rbh
tRNA-i(6)A37 thiotransferase enzyme MiaB
SCNpilot_cont_300_bf_scaffold_151_11
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9882..11183
DNA (1302bp) protein (434aa)
Transcriptional regulator n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ49_NIAKG rbh
ATPase AAA {ECO:0000313|EMBL:KIC90125.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_151_12
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11313..12182
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYC6_DYAFD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91605.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
SCNpilot_cont_300_bf_scaffold_151_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12268..13176
DNA (909bp) protein (303aa)
ABC transporter related n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNW4_CHIPD rbh
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACU58661.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
SCNpilot_cont_300_bf_scaffold_151_14
Capnocytophaga sp. oral taxon 412, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13250..13615
DNA (366bp) protein (122aa)
Four helix bundle protein n=1 Tax=Capnocytophaga sp. oral taxon 412 str. F0487 RepID=I9PDI6_9FLAO
Four helix bundle protein {ECO:0000313|EMBL:EIW93054.1}; TaxID=1125721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_151_15
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13700..14470
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FUI7_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EIA07934.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobact
hypothetical protein
SCNpilot_cont_300_bf_scaffold_151_16
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14460..14846
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIF2_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU63714.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
SCNpilot_cont_300_bf_scaffold_151_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15036..15710)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGE2_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97365.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_cont_300_bf_scaffold_151_18
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15773..16588)
DNA (816bp) protein (272aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAE1_CHIPD rbh
3-methyl-2-oxobutanoate hydroxymethyltransferase
SCNpilot_cont_300_bf_scaffold_151_19
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16826..17800
DNA (975bp) protein (325aa)
Deoxyhypusine synthase-like protein {ECO:0000313|EMBL:CEN44233.1}; EC=2.5.1.46 {ECO:0000313|EMBL:CEN44233.1};; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobact
deoxyhypusine synthase-like protein (EC:2.5.1.46)
Deoxyhypusine synthase-like protein n=1 Tax=Capnocytophaga canimorsus (strain 5) RepID=F9YR03_CAPCC rbh
SCNpilot_cont_300_bf_scaffold_151_20
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17910..19262
DNA (1353bp) protein (451aa)
MATE efflux family protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C176_SPHS2
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:ADZ78010.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingob
SCNpilot_cont_300_bf_scaffold_151_21
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19268..20254
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI000361C635
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG58878.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC
SCNpilot_cont_300_bf_scaffold_151_22
unknown

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20377..20757
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_151_23
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20769..21677
DNA (909bp) protein (303aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
Ribonuclease Z n=1 Tax=Niabella soli DSM 19437 RepID=H1NRY9_9SPHI rbh
beta-lactamase
SCNpilot_cont_300_bf_scaffold_151_24
unknown

Not on your lists

21856..21978
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_151_25
unknown

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22104..22316
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_151_26
unknown

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comp(22320..22796)
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_151_27
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23240..24913
DNA (1674bp) protein (558aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DYF0_PSEMN rbh
hypothetical protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_151_28
unknown

Not on your lists

comp(25064..25159)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_151_29
unknown

Not on your lists

25232..25819
DNA (588bp) protein (196aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_151_30
unknown

Not on your lists

25859..26269
DNA (411bp) protein (137aa)

This feature has no annotations

Displaying items 1-30 of 192 in total

View Taxonomy