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SCNpilot_cont_300_bf_scaffold_300

Search features with annotation key words

Displaying items 1-30 of 169 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_300_1
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(46..1101)
DNA (1056bp) protein (352aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFG9_FLUTR rbh
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEA45683.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluvii
SCNpilot_cont_300_bf_scaffold_300_2
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1126..2409)
DNA (1284bp) protein (428aa)
Outer membrane efflux protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFH0_FLUTR rbh
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AEA45684.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="F
SCNpilot_cont_300_bf_scaffold_300_3
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2440..2832)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037678E9
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:ESU28456.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavob
lactoylglutathione lyase-like lyase
SCNpilot_cont_300_bf_scaffold_300_4
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2856..3191)
DNA (336bp) protein (112aa)
cupin n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036F07A6
cupin domain-containing protein
Cupin domain protein {ECO:0000313|EMBL:BAR52560.1}; TaxID=1307833 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia KS16.;"
SCNpilot_cont_300_bf_scaffold_300_5
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3201..3656)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Galbibacter marinus RepID=K2QH34_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKF54057.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_300_6
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3653..4219)
DNA (567bp) protein (189aa)
Transcriptional regulator n=1 Tax=Galbibacter marinus RepID=K2NZ10_9FLAO
Transcriptional regulator {ECO:0000313|EMBL:EKF54058.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_300_7
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4371..6371)
DNA (2001bp) protein (667aa)
Putative uncharacterized protein n=1 Tax=Myroides odoratimimus CCUG 12901 RepID=H1GZC4_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:CDS98960.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
hypothetical protein
SCNpilot_cont_300_bf_scaffold_300_8
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6496..7800)
DNA (1305bp) protein (435aa)
Relaxase n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NPU5_9SPHI rbh
Relaxase/mobilization nuclease
Relaxase/mobilization nuclease family protein {ECO:0000313|EMBL:ADZ80120.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.
SCNpilot_cont_300_bf_scaffold_300_9
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7797..8291)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NVN5_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:CDT21076.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
hypothetical protein
SCNpilot_cont_300_bf_scaffold_300_10
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8976..9743
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Myroides odoratimimus CCUG 12901 RepID=H1GZC8_9FLAO rbh
chromosome partitioning ATPase
Chromosome partitioning ATPase {ECO:0000313|EMBL:ADZ80118.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphi
SCNpilot_cont_300_bf_scaffold_300_11
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9749..10162
DNA (414bp) protein (138aa)
Conjugal transfer protein TraB n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MMQ5_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52225.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedob
SCNpilot_cont_300_bf_scaffold_300_12
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10174..10812
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=Myroides odoratimimus CCUG 12901 RepID=H1GZD0_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52227.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedob
SCNpilot_cont_300_bf_scaffold_300_13
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10832..11611)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2E2X0_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EOZ96483.1}; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_300_14
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11638..12684)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZKX8_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EON74679.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacte
hypothetical protein
SCNpilot_cont_300_bf_scaffold_300_15

Not on your lists

comp(12688..13824)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EJ18_GEOBB
Marine sediment metagenome DNA, contig: S12H4_S04130 {ECO:0000313|EMBL:GAI99897.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
SCNpilot_cont_300_bf_scaffold_300_16
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13829..14734)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EJ19_GEOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACH39974.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjien
SCNpilot_cont_300_bf_scaffold_300_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14755..15090)
DNA (336bp) protein (112aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8XRF8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKA79195.1}; TaxID=1073388 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 616.;
helix-turn-helix domain protein
SCNpilot_cont_300_bf_scaffold_300_18
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15285..15590
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S7H3_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52233.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;"
SCNpilot_cont_300_bf_scaffold_300_19
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15602..15934
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5U6_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ80111.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
SCNpilot_cont_300_bf_scaffold_300_20
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15931..18438
DNA (2508bp) protein (836aa)
TraG family conjugation system ATPase n=1 Tax=Myroides odoratimimus CCUG 12901 RepID=H1GZD9_9FLAO rbh
type IV secretory pathway VirB4 components-like protein
Type IV secretory pathway VirB4 components-like protein {ECO:0000313|EMBL:ADY52235.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudop
SCNpilot_cont_300_bf_scaffold_300_21
unknown

Not on your lists

18459..18674
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_300_22
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18737..19369
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S7H6_PEDSD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52236.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;"
SCNpilot_cont_300_bf_scaffold_300_23
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19373..20371
DNA (999bp) protein (333aa)
Conjugal transfer protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NVL7_9SPHI rbh
hypothetical protein
Conjugative transposon TraJ protein {ECO:0000313|EMBL:ADZ80108.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source=
SCNpilot_cont_300_bf_scaffold_300_24
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20383..21006
DNA (624bp) protein (208aa)
Conjugal transfer protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MK32_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:CDT29825.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
hypothetical protein
SCNpilot_cont_300_bf_scaffold_300_25
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21017..21445
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5U1_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ80106.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
SCNpilot_cont_300_bf_scaffold_300_26
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21459..21743
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5U0_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ80105.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
SCNpilot_cont_300_bf_scaffold_300_27
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21733..23064
DNA (1332bp) protein (444aa)
Conjugal transfer protein TraM n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NPT3_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:CDT29797.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
hypothetical protein
SCNpilot_cont_300_bf_scaffold_300_28
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23092..23994
DNA (903bp) protein (301aa)
Conjugate transposon protein TraN n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S7I2_PEDSD rbh
conjugate transposon protein TraN
Conjugate transposon protein TraN {ECO:0000313|EMBL:ADY52242.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedo
SCNpilot_cont_300_bf_scaffold_300_29
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24012..24569
DNA (558bp) protein (186aa)
Conjugative transposon protein TraO n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S7I3_PEDSD rbh
Conjugative transposon protein TraO
Conjugative transposon protein TraO {ECO:0000313|EMBL:ADY52243.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudope
SCNpilot_cont_300_bf_scaffold_300_30
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24581..25015
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5T6_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ80101.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;"
Displaying items 1-30 of 169 in total

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