ggKbase home page

SCNpilot_cont_300_bf_scaffold_529

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_529_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..1003
DNA (1002bp) protein (334aa)
RHS repeat-associated core domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TA71_NIAKG
RHS repeat-associated core domain-containing protein
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AEW03409.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Nia
SCNpilot_cont_300_bf_scaffold_529_2
unknown

Not on your lists

1063..1740
DNA (678bp) protein (226aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_529_3
unknown

Not on your lists

1712..2410
DNA (699bp) protein (233aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_529_4
unknown

Not on your lists

2479..2694
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_529_5
unknown

Not on your lists

2787..3542
DNA (756bp) protein (252aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_529_6
unknown

Not on your lists

3552..4169
DNA (618bp) protein (206aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_529_7
unknown

Not on your lists

4184..4342
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_529_8
unknown

Not on your lists

4441..5334
DNA (894bp) protein (298aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_529_9
unknown

Not on your lists

5318..5878
DNA (561bp) protein (187aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_529_10
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6043..6807
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z570_FLABF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB68576.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium bra
SCNpilot_cont_300_bf_scaffold_529_11
unknown

Not on your lists

6925..7512
DNA (588bp) protein (196aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_529_12
unknown

Not on your lists

7859..8509
DNA (651bp) protein (217aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_529_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8968..11583
DNA (2616bp) protein (872aa)
DNA mismatch repair protein MutS n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB24_CHIPD rbh
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae
DNA mismatch repair protein MutS
SCNpilot_cont_300_bf_scaffold_529_14
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11589..12155
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0003027912
Pentapeptide repeat-containing protein {ECO:0000313|EMBL:KIA82550.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Ch
pentapeptide repeat-containing protein
SCNpilot_cont_300_bf_scaffold_529_15
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12248..15208
DNA (2961bp) protein (987aa)
Putative uncharacterized protein id=4241549 bin=GWF2_Bacteroidetes_33_38 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
hypothetical protein Tax=GWF2_Bacteroidetes_33_38_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_529_16
Candidatus Magnetoovum chiemensis, Candidatus Magnetoovum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(15746..17269)
DNA (1524bp) protein (508aa)
Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AJS5_FLELS
Poly(R)-hydroxyalkanoic acid synthase subunit PhaE {ECO:0000313|EMBL:KJR41033.1}; TaxID=1609970 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetoovum.;" source="Candida
Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E)
SCNpilot_cont_300_bf_scaffold_529_17
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17565..18098
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CJ36_ELIME
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:KFC18072.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonim
alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen
SCNpilot_cont_300_bf_scaffold_529_18
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18165..20315
DNA (2151bp) protein (717aa)
Protein-disulfide reductase n=1 Tax=Niabella soli DSM 19437 RepID=H1NP77_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO43023.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
thiol:disulfide interchange protein DsbD
SCNpilot_cont_300_bf_scaffold_529_19
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20418..22346
DNA (1929bp) protein (643aa)
membrane sulfatase (EC:3.1.6.-) Tax=GWF2_Bacteroidetes_35_48_curated
membrane sulfatase (EC:3.1.6.-)
Putative sulfatase id=4096363 bin=GWF2_Bacteroidetes_35_48 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 rbh
SCNpilot_cont_300_bf_scaffold_529_20
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22392..22883
DNA (492bp) protein (164aa)
Phosphoribosyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PE94_CHIPD
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:ACU63303.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pin
SCNpilot_cont_300_bf_scaffold_529_21
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23011..25587
DNA (2577bp) protein (859aa)
ATPase AAA-2 domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMC9_CHIPD rbh
ATPase AAA
ATPase AAA-2 domain protein {ECO:0000313|EMBL:ACU64034.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga p
SCNpilot_cont_300_bf_scaffold_529_22
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25771..26532
DNA (762bp) protein (254aa)
TonB family domain-containing protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5I7H9_9PORP
TonB family domain-containing protein {ECO:0000313|EMBL:CCY38018.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;
hypothetical protein
SCNpilot_cont_300_bf_scaffold_529_23
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26579..30436
DNA (3858bp) protein (1286aa)
Mucin 2, oligomeric mucus/gel-forming n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGW1_NIAKG
mucin 2, oligomeric mucus/gel-forming
CHU large protein uncharacterized {ECO:0000313|EMBL:EAZ94942.1}; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacterium BAL38.;"
SCNpilot_cont_300_bf_scaffold_529_24
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30642..31817)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2IY20_9SPHI rbh
Methyltransferase {ECO:0000313|EMBL:KIA94248.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensi
SAM-dependent methyltransferase
SCNpilot_cont_300_bf_scaffold_529_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31945..33459)
DNA (1515bp) protein (505aa)
Phosphoribosylaminoimidazolecarboxamide formyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMM6_NIAKG rbh
phosphoribosylaminoimidazolecarboxamide formyltransferase
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chi
SCNpilot_cont_300_bf_scaffold_529_26
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

33744..36029
DNA (2286bp) protein (762aa)
Transporter, CPA2 family n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11PB0_CYTH3
Na+/H+-exchanging protein
Transporter, CPA2 family {ECO:0000313|EMBL:ABG60753.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC
SCNpilot_cont_300_bf_scaffold_529_27
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36026..36664)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034A961D
Methyltransferase type 11 {ECO:0000313|EMBL:KIA97242.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium s
type 11 methyltransferase
SCNpilot_cont_300_bf_scaffold_529_28
Ancylostoma ceylanicum, Ancylostoma, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

comp(36684..37397)
DNA (714bp) protein (238aa)
ATPase, AAA family n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VRE5_9SPHI rbh
ATPase, AAA family {ECO:0000313|EMBL:EPB65751.1}; TaxID=53326 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomati
ATPase AAA
SCNpilot_cont_300_bf_scaffold_529_29
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37436..38014)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6E930_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EDM37661.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BA
Lysine decarboxylase family
SCNpilot_cont_300_bf_scaffold_529_30
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38048..38758)
DNA (711bp) protein (237aa)
DsbA-like protein {ECO:0000313|EMBL:EFK56380.1}; EC=5.3.4.1 {ECO:0000313|EMBL:EFK56380.1};; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sp
DsbA-like protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VRH9_9SPHI
DSBA oxidoreductase
Displaying items 1-30 of 32 in total

View Taxonomy