ggKbase home page

SCNpilot_cont_300_bf_scaffold_109_29

Organism: SCNPILOT_CONT_300_BF_Bacteroidetes_43_15

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 35218..35931

Top 3 Functional Annotations

Value Algorithm Source
Putative lipopolysaccharide biosynthesis glycosyltransferase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EBT0_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 51.8
  • Coverage: 226.0
  • Bit_score: 245
  • Evalue 5.40e-62
Putative lipopolysaccharide biosynthesis glycosyltransferase {ECO:0000313|EMBL:EDM37179.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pe similarity UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 226.0
  • Bit_score: 245
  • Evalue 7.60e-62
family 2 glycosyl transferase similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 244.0
  • Bit_score: 235
  • Evalue 2.10e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter sp. BAL39 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 714
ATGGTCACACAACTTTATGTAATAGATAATTCTGCAATTGATCAGATAAGTTCTAAACTCAAGTTTGACAATAGGATAATTTATATGCATTTTCCGGGCAATCTGGGATATGGGAAAGCACATAATGTAGCTATGCGCGAGACCATGAATAGTTCCGATTATCATGTAGTACTCAATCCTGATTTATTATTTGATAGAAAATGCCTGGAATCATTAGGGAACTTCATGGAAGAAAATACCCATGTAGGCCTGGTGATGCCTAAAATTATTTATCCTGATGGCCGTATTCAGTATCTTTGTAAAAATAATCCTACTCCTTATATTTTATTGGCCCGGCGCTTTATGAAAGGCCTTGGACAGAAGCGTATGGAAGAATCGCTTTATTTCTTTGAAAATAAAGATAAAGATTATGAAAAACCTATGTTTCATATCCCCTTTCTTTCCGGTTGCTTCATGTTTTTGAGATGCAGCACATTGCAGCAGGCGGGCTTATTTGATGAACGTATATTCATGTACACCGAAGATGCCGATTTGAGCAGGAGGATCCTGCAGATCGCAGAAACGGCCTATTTCCCTGAAGCAGTTGTCGTGCATGACTTTAAAGGAGGGGTTCATAAAAGCACCTTATTGACCTGGTACGGGTTCAGGTCTTCATTATACTATTTTAATAAATGGGGATGGCGCAATAAGATCGACCGGGAAGTAGTTCAGTGA
PROTEIN sequence
Length: 238
MVTQLYVIDNSAIDQISSKLKFDNRIIYMHFPGNLGYGKAHNVAMRETMNSSDYHVVLNPDLLFDRKCLESLGNFMEENTHVGLVMPKIIYPDGRIQYLCKNNPTPYILLARRFMKGLGQKRMEESLYFFENKDKDYEKPMFHIPFLSGCFMFLRCSTLQQAGLFDERIFMYTEDADLSRRILQIAETAYFPEAVVVHDFKGGVHKSTLLTWYGFRSSLYYFNKWGWRNKIDREVVQ*