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SCNpilot_cont_300_bf_scaffold_109

Search features with annotation key words

Displaying items 1-30 of 288 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_109_1
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(401..2632)
DNA (2232bp) protein (744aa)
Polymorphic outer membrane protein repeat (3 repeats) (Fragment) n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VLS6_9SPHI
Polymorphic outer membrane protein repeat (3 repeats) {ECO:0000313|EMBL:EFK58228.1}; Flags: Fragment;; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacte
fibronectin type III domain-containing protein
SCNpilot_cont_300_bf_scaffold_109_2
unknown

Not on your lists

comp(3045..3431)
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_109_3
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3460..5253)
DNA (1794bp) protein (598aa)
Polymorphic outer membrane protein repeat (3 repeats) (Fragment) n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VLS6_9SPHI
Polymorphic outer membrane protein repeat (3 repeats) {ECO:0000313|EMBL:EFK58228.1}; Flags: Fragment;; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacte
fibronectin type III domain-containing protein
SCNpilot_cont_300_bf_scaffold_109_4
unknown

Not on your lists

comp(5430..6596)
DNA (1167bp) protein (389aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_109_5
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7179..9077)
DNA (1899bp) protein (633aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003616BEC rbh
hypothetical protein Tax=GWF2_Bacteroidetes_38_335_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_109_6
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9498..10445
DNA (948bp) protein (316aa)
N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase (EC:2.4.1.150) id=14425015 bin=bin1_lowGC species=Serratia sp. M24T3 genus=Serratia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP rbh
Glycosyl transferase {ECO:0000313|EMBL:KFF21993.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp
glycosyl transferase family protein
SCNpilot_cont_300_bf_scaffold_109_7
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10696..11754
DNA (1059bp) protein (353aa)
3-oxoacyl-(Acyl-carrier-protein) synthase III n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JL20_9FLAO rbh
3-oxoacyl-(Acyl-carrier-protein) synthase III {ECO:0000313|EMBL:EJL68565.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" so
putative beta-ketoacyl-acyl-carrier protein synthase III
SCNpilot_cont_300_bf_scaffold_109_8
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11911..12693)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0NKZ2_ELIME
Uncharacterized protein {ECO:0000313|EMBL:EQB92856.1}; TaxID=1355388 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia m
hypothetical protein
SCNpilot_cont_300_bf_scaffold_109_9
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12775..13581)
DNA (807bp) protein (269aa)
Methyltransferase type 11 n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BVV9_9FLAO
Methyltransferase type 11 {ECO:0000313|EMBL:EHQ01842.1}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15
type 12 methyltransferase
SCNpilot_cont_300_bf_scaffold_109_10
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13611..14231)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XNE5_FLAIG
yoqW; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG52062.1}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium ind
SCNpilot_cont_300_bf_scaffold_109_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(14332..15666)
DNA (1335bp) protein (445aa)
Protein translocase subunit SecY n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU91_CHIPD
secY; preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae
SCNpilot_cont_300_bf_scaffold_109_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(15797..16243)
DNA (447bp) protein (149aa)
50S ribosomal protein L15 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU90_CHIPD
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flav
50S ribosomal protein L15
SCNpilot_cont_300_bf_scaffold_109_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(16325..16507)
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU89_CHIPD
50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chiti
SCNpilot_cont_300_bf_scaffold_109_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(16555..17106)
DNA (552bp) protein (184aa)
30S ribosomal protein S5 n=1 Tax=Niabella soli DSM 19437 RepID=H1NNU9_9SPHI
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabel
SCNpilot_cont_300_bf_scaffold_109_15
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(17129..17491)
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=1 Tax=Krokinobacter sp. (strain 4H-3-7-5) RepID=F4AW80_KROS4
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlan
50S ribosomal protein L18
SCNpilot_cont_300_bf_scaffold_109_16
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(17712..18266)
DNA (555bp) protein (185aa)
50S ribosomal protein L6 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU86_CHIPD
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavi
50S ribosomal protein L6
SCNpilot_cont_300_bf_scaffold_109_17
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18725..20677)
DNA (1953bp) protein (651aa)
Uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZQP1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:GAL86187.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
PKD domain-containing protein
SCNpilot_cont_300_bf_scaffold_109_18
unknown

Not on your lists

comp(20713..21081)
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_109_19
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21740..23680)
DNA (1941bp) protein (647aa)
hypothetical protein, partial n=1 Tax=Segetibacter koreensis RepID=UPI00037FBD2A
PKD domain-containing protein
Tax=BJP_08E140C01_Bacteriodales_41_10
SCNpilot_cont_300_bf_scaffold_109_20
unknown

Not on your lists

23712..23918
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_109_21
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24284..26197)
DNA (1914bp) protein (638aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI000381F8FB
hypothetical protein Tax=GWF2_Bacteroidetes_35_48_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_109_22
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26958..28631)
DNA (1674bp) protein (558aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F2174
Uncharacterized protein {ECO:0000313|EMBL:KGN82770.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
FG-GAP repeat-containing protein
SCNpilot_cont_300_bf_scaffold_109_23
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28821..30803
DNA (1983bp) protein (661aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synt
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036DA8C9 rbh
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
SCNpilot_cont_300_bf_scaffold_109_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30952..31413)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEE6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98356.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_cont_300_bf_scaffold_109_25
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

31569..32567
DNA (999bp) protein (333aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Ma
tRNA-dihydrouridine synthase n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TR57_MARTH rbh
tRNA-u20-dihydrouridine synthase
SCNpilot_cont_300_bf_scaffold_109_26
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32597..33931
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360617F
Uncharacterized protein {ECO:0000313|EMBL:KIC89703.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_cont_300_bf_scaffold_109_27
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33906..34664)
DNA (759bp) protein (253aa)
Capsular polysaccharide biosynthesis protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C970_SPHS2
capsular polysaccharide biosynthesis protein
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:ADZ78397.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;
SCNpilot_cont_300_bf_scaffold_109_28
unknown

Not on your lists

35034..35165
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_109_29
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35218..35931
DNA (714bp) protein (238aa)
Putative lipopolysaccharide biosynthesis glycosyltransferase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EBT0_9SPHI
Putative lipopolysaccharide biosynthesis glycosyltransferase {ECO:0000313|EMBL:EDM37179.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pe
family 2 glycosyl transferase
SCNpilot_cont_300_bf_scaffold_109_30
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35952..37064
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036ED50F
Lipid A disaccharide synthase {ECO:0000313|EMBL:GAO41256.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihum
lipid-A-disaccharide synthase
Displaying items 1-30 of 288 in total

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