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SCNpilot_cont_300_bf_scaffold_109

Search features with annotation key words

Displaying items 31-60 of 288 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_109_31
Capnocytophaga sp. oral taxon 326, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

37174..38400
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 326 str. F0382 RepID=L1PFI9_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EKY14225.1}; TaxID=1035193 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp.
uncharacterized protein
SCNpilot_cont_300_bf_scaffold_109_32
Niabella aurantiaca, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

38409..38936
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036B4543
SCNpilot_cont_300_bf_scaffold_109_33
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(39048..40619)
DNA (1572bp) protein (524aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphing
Ribonuclease Y n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU48_CHIPD rbh
phosphodiesterase
SCNpilot_cont_300_bf_scaffold_109_34
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

40803..41672
DNA (870bp) protein (290aa)
Bifunctional protein FolD n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLJ9_NIAKG
bifunctional protein folD
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koree
SCNpilot_cont_300_bf_scaffold_109_35
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


41853..42884
DNA (1032bp) protein (344aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
phenylalanyl-tRNA synthetase subunit alpha n=1 Tax=Segetibacter koreensis RepID=UPI00035EBBA8
phenylalanyl-tRNA synthetase subunit alpha
SCNpilot_cont_300_bf_scaffold_109_36
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

42959..43927
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F6713
NAD-dependent epimerase/dehydratase Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
NAD-dependent epimerase/dehydratase
SCNpilot_cont_300_bf_scaffold_109_37
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

44103..45863
DNA (1761bp) protein (587aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=485918 specie
Transcription termination factor Rho n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLF9_CHIPD rbh
transcription termination factor Rho
SCNpilot_cont_300_bf_scaffold_109_38
unknown

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45904..46032
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_109_39
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46037..47863
DNA (1827bp) protein (609aa)
Lysyl endopeptidase (EC:3.4.21.50) Tax=GWF2_Bacteroidetes_38_335_curated
Lysyl endopeptidase id=3878156 bin=GWF2_Bacteroidetes_38_335 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
extracellular protease
SCNpilot_cont_300_bf_scaffold_109_40
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(47987..49246)
DNA (1260bp) protein (420aa)
Chloride channel protein n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0NM85_ELIME rbh
Chloride channel protein {ECO:0000313|EMBL:KGO09899.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia m
Cl-channel, voltage-gated family protein
SCNpilot_cont_300_bf_scaffold_109_41
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(49344..50804)
DNA (1461bp) protein (487aa)
Putative uncharacterized protein id=1744820 bin=GWB2_Bacteroidetes_32_14 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47 rbh
hypothetical protein; K02004 putative ABC transport system permease protein Tax=GWD2_Bacteroidetes_33_33_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_109_42
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50929..51594)
DNA (666bp) protein (222aa)
ABC transporter n=1 Tax=Clostridium tyrobutyricum RepID=UPI0002F49E4F
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CDL91720.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_109_43
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

51886..53721
DNA (1836bp) protein (612aa)
Lysyl endopeptidase (EC:3.4.21.50) Tax=GWA2_Bacteroidetes_32_17_curated
Lysyl endopeptidase id=5037218 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
putative lysyl endopeptidase
SCNpilot_cont_300_bf_scaffold_109_44
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

53909..55537
DNA (1629bp) protein (543aa)
Methylcrotonoyl-CoA carboxylase {ECO:0000313|EMBL:ACU61116.1}; EC=6.4.1.4 {ECO:0000313|EMBL:ACU61116.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinoph
Methylcrotonoyl-CoA carboxylase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAB2_CHIPD rbh
methylcrotonoyl-CoA carboxylase
SCNpilot_cont_300_bf_scaffold_109_45
Bacteroides sp. CAG:462, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

55708..56247
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003741DB5
Sigma-70 region 2 {ECO:0000313|EMBL:CDD81634.1}; TaxID=1262740 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides s
putative RNA polymerase ECF-type sigma factor
SCNpilot_cont_300_bf_scaffold_109_46
unknown

Not on your lists

56254..57363
DNA (1110bp) protein (370aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_109_47
unknown

Not on your lists

57360..58448
DNA (1089bp) protein (363aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_109_48
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(58522..59199)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00035CA653
Uncharacterized protein {ECO:0000313|EMBL:CDS91884.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
putative prophage LambdaCh01, repressor protein
SCNpilot_cont_300_bf_scaffold_109_49
Nonlabens dokdonensis, Nonlabens, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

59306..59698
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Nonlabens dokdonensis (strain DSM 17205 / KCTC 12402 / DSW-6) RepID=L7W8Q5_NONDD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC76602.1}; TaxID=592029 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Nonlabens.;" source="Nonlabens dokdonensis (s
SCNpilot_cont_300_bf_scaffold_109_50
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

59703..60410
DNA (708bp) protein (236aa)
PspA/IM30 family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VHP1_9SPHI
Phage-shock protein {ECO:0000313|EMBL:KFC24205.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. F
phage shock protein A PspA
SCNpilot_cont_300_bf_scaffold_109_51
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

60485..61156
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VHP0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KFC24203.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas s
Protein of unknown function DUF1449
SCNpilot_cont_300_bf_scaffold_109_52
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

61198..63246
DNA (2049bp) protein (683aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00035EE7CB rbh
SPFH domain / band 7 family protein {ECO:0000313|EMBL:KGE15057.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source
hypothetical protein
SCNpilot_cont_300_bf_scaffold_109_53
unknown

Not on your lists

63293..63790
DNA (498bp) protein (166aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_109_54
unknown

Not on your lists

63760..64335
DNA (576bp) protein (192aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_109_55
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

64353..64778
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000382F28E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD57515.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_109_56
Myroides profundi, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

64886..69721
DNA (4836bp) protein (1612aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VHN8_9SPHI rbh
MoxR-like ATPase
MoxR-like ATPase {ECO:0000313|EMBL:AJH16038.1}; TaxID=480520 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides profundi.;"
SCNpilot_cont_300_bf_scaffold_109_57
unknown

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69768..70181
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_109_58
unknown

Not on your lists

70189..70617
DNA (429bp) protein (143aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_109_59
unknown

Not on your lists

70686..71708
DNA (1023bp) protein (341aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_109_60
unknown

Not on your lists

comp(71862..72308)
DNA (447bp) protein (149aa)

This feature has no annotations

Displaying items 31-60 of 288 in total

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