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SCNpilot_cont_300_bf_scaffold_109_37

Organism: SCNPILOT_CONT_300_BF_Bacteroidetes_43_15

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 44103..45863

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=485918 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 595.0
  • Bit_score: 730
  • Evalue 1.90e-207
Transcription termination factor Rho n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLF9_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 595.0
  • Bit_score: 730
  • Evalue 1.40e-207
  • rbh
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 595.0
  • Bit_score: 730
  • Evalue 3.80e-208

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1761
ATGCCTTACGACATCAATCAACTTCAAGACATGATTGTTCCTGAGCTCAATGATATTGCAGAGCAGCTTGGCGTAGCAAATTTTAAAAAATTAGAGAAGCAGGACCTTATCTATAAAATTATAGATAAACAAGCTTTCCAGGCCTCTGAAGGTGCAGAAGACAAACCTGCAAAAAGAATCAAAAAAGCCAGAGTCAAAAAAGCAATTACTCCAGATCAGACAAGCGCAGCGCCAGAACCGGCAATAGAAAGTACAGCAGCAGAAAGCGCAGAAGAGATTATCCCGGCAGAGAAAGAGAAGAAGATAGCAAGGCCCAGAAAGCAGTTAAAGAAGACTAAACCGGAAGCCGAGATCATCAACGATGCAAAATCACTGGAATTTGATGATGTTGATGATAAAGAAACCGACAATAAACCTTCCCTGTTTGAAGTAGCAGAAACGACCAAGCCTATACTGACAGAATCCGGAGATGTCATTGAAATGCAGGCCCCCAATCCGGTAGCAGAGCCGGCTCCGCAAGAGCAAAGACAAGGCCAGCAACAGAAAAACCGCCAACCGCAACACCAGAATCAAAATAACCGCAATAATAACAACAACAATAACCGTAATCAGCAAGCGGAAAGCAATACGGGCTTCAACATTGAATTTGACGGTGTTATTGAAAGCGAAGGTGTTTTAGAAATGATGCCGGACGGCTATGGCTTCTTAAGAAGCAGCGATTACAACTACTTAAGTTCCCCCGACGATATCTACGTCTCCCCCTCCCAGATCAAACTTTTCGGACTTAAAACCGGCGATAACGTAAAAGGTAATGTACGCCCGCCAAAAGAAGGCGAAAAATATTTTGCCCTCTTAAAAGTAGCTACCATCAACGGGCGTTTGCCAGAAGAGATCAGGGACCGCGTACCTTTTGATTACCTCACCCCATTATTCCCGAATGAAAAATTAAATTTAGATATGGGTGCCAGCAACCTGAGCACACGTATCATGGATTTGTTTACCCCAATCGGTAAAGGACAGAGAGGATTGATCGTAGCGCAACCTAAGACCGGTAAAACCATGCTGCTGAAAGAGATCGCCAATGCGATCGCGACCAATCACCCGGAAGTGTACCTGATGATCGTTCTGATCGATGAGCGCCCGGAAGAGGTGACCGATATGCAGCGTAGTGTGAATGCCGAGGTCATCGCCTCCACTTTTGATGAGCCTGCAGAGAAACATGTAAAAGTATCCGGTATCGCTTTACAAAAAGCTAAACGCCTGGTGGAAGTAGGGCACGATGTAGTGATCCTGCTGGATTCCATCACCCGCCTGGCACGTGCACACAATACCGTAGCACCTGCATCCGGTAAAGTATTGAGCGGTGGTGTGGAAGCCAACGCGATGCAAAAGCCAAAACAATTCTTTGGTGCTGCACGTAAAATAGAAAACGGTGGTTCCCTCACCATCCTGGCTACCGCCCTGACCGATACGGGTTCCCGTATGGATGATTATATCTTCGAGGAATTTAAAGGTACCGGTAATATGGAATTACAACTCGACCGTAAACTGGCCAATAAACGTATCTTCCCGGCTATAGATATCACTTCATCTTCTACCCGTCGTGACGACCTGTTGATGAGCAAAGATACTTTAGGTAAAATGTGGATCCTGCGCAATCACCTGGCCGATATGAATACTGATGAAGCTATGAAATTCTTAATGCAAAACCTGAAAGGTACCCGCAATAATGAAGAATTCCTGATTACAATGAACAAGTAA
PROTEIN sequence
Length: 587
MPYDINQLQDMIVPELNDIAEQLGVANFKKLEKQDLIYKIIDKQAFQASEGAEDKPAKRIKKARVKKAITPDQTSAAPEPAIESTAAESAEEIIPAEKEKKIARPRKQLKKTKPEAEIINDAKSLEFDDVDDKETDNKPSLFEVAETTKPILTESGDVIEMQAPNPVAEPAPQEQRQGQQQKNRQPQHQNQNNRNNNNNNNRNQQAESNTGFNIEFDGVIESEGVLEMMPDGYGFLRSSDYNYLSSPDDIYVSPSQIKLFGLKTGDNVKGNVRPPKEGEKYFALLKVATINGRLPEEIRDRVPFDYLTPLFPNEKLNLDMGASNLSTRIMDLFTPIGKGQRGLIVAQPKTGKTMLLKEIANAIATNHPEVYLMIVLIDERPEEVTDMQRSVNAEVIASTFDEPAEKHVKVSGIALQKAKRLVEVGHDVVILLDSITRLARAHNTVAPASGKVLSGGVEANAMQKPKQFFGAARKIENGGSLTILATALTDTGSRMDDYIFEEFKGTGNMELQLDRKLANKRIFPAIDITSSSTRRDDLLMSKDTLGKMWILRNHLADMNTDEAMKFLMQNLKGTRNNEEFLITMNK*