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SCNpilot_cont_300_bf_scaffold_358

Search features with annotation key words

Displaying items 1-30 of 170 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_358_1
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..239
DNA (237bp) protein (79aa)
Putative chemotaxis transducer n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R699_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB11108.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
putative chemotaxis transducer
SCNpilot_cont_300_bf_scaffold_358_2
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

330..3338
DNA (3009bp) protein (1003aa)
Putative chemotaxis transducer n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R699_PELHB
Putative chemotaxis transducer {ECO:0000313|EMBL:KFC71825.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;
putative chemotaxis transducer
SCNpilot_cont_300_bf_scaffold_358_3
Mesorhizobium sp. L103C105A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3436..3735
DNA (300bp) protein (100aa)
UPI0003CFBF11 related cluster n=1 Tax=unknown RepID=UPI0003CFBF11
Uncharacterized protein {ECO:0000313|EMBL:ESZ77726.1}; TaxID=1287074 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_358_4
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3707..4084
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S716_GEOOG
Uncharacterized protein {ECO:0000313|EMBL:CDP53792.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_358_5
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4225..4587
DNA (363bp) protein (121aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAA
Methylglyoxal synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG83_PELHB
methylglyoxal synthase
SCNpilot_cont_300_bf_scaffold_358_6
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4736..5518
DNA (783bp) protein (261aa)
Branched-chain amino acid transport ATP-binding protein LivG n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG82_PELHB
Branched-chain amino acid ABC transporter ATPase {ECO:0000313|EMBL:KFL25403.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source=
branched-chain amino acid transport ATP-binding protein LivG
SCNpilot_cont_300_bf_scaffold_358_7
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5518..6222
DNA (705bp) protein (235aa)
Branched-chain amino acid transport ATP-binding protein LivF n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG81_PELHB
Branched-chain amino acid ABC transporter ATPase {ECO:0000313|EMBL:KKB77607.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source=
branched-chain amino acid transport ATP-binding protein LivF
SCNpilot_cont_300_bf_scaffold_358_8
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6227..7228
DNA (1002bp) protein (334aa)
High-affinity branched-chain amino acid transport system permease protein LivH n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG80_PELHB rbh
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KKB11019.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source
high-affinity branched-chain amino acid transport system permease protein LivH
SCNpilot_cont_300_bf_scaffold_358_9
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7225..8223
DNA (999bp) protein (333aa)
Branched-chain amino acid transport system permease protein LivM n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG79_PELHB
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KFL29920.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source=
branched-chain amino acid transport system permease protein LivM
SCNpilot_cont_300_bf_scaffold_358_10
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8195..8464
DNA (270bp) protein (90aa)
Branched-chain amino acid transport system permease protein LivM n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG79_PELHB
Branched-chain amino acid transport system permeas e protein LivM {ECO:0000313|EMBL:CDP53787.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; D
branched-chain amino acid transport system permease protein LivM
SCNpilot_cont_300_bf_scaffold_358_11
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8532..9071
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2A8Z4_RHIET
Uncharacterized protein {ECO:0000313|EMBL:KEC71176.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
SCNpilot_cont_300_bf_scaffold_358_12
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9071..9724
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030ECC8D rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB11017.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
RES domain-containing protein
SCNpilot_cont_300_bf_scaffold_358_13
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9772..10419)
DNA (648bp) protein (216aa)
TetR-lik transcriptional regulator n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2HKN8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKC32678.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
TetR-lik transcriptional regulator
SCNpilot_cont_300_bf_scaffold_358_14
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10452..11387)
DNA (936bp) protein (312aa)
Putative oxidoreductase/Short-chain dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9D1_PELHB
FabG protein {ECO:0000313|EMBL:BAQ45601.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticu
putative oxidoreductase/Short-chain dehydrogenase
SCNpilot_cont_300_bf_scaffold_358_15
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11530..12738)
DNA (1209bp) protein (403aa)
Branched-chain amino acid ABC transporter, amino acid-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG76_PELHB
branched-chain amino acid ABC transporter, amino acid-binding protein
Branched-chain amino acid ABC transporter, amino acid-binding protein {ECO:0000313|EMBL:AEQ53052.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiacea
SCNpilot_cont_300_bf_scaffold_358_16
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13044..14114
DNA (1071bp) protein (357aa)
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG75_PELHB
Uncharacterized protein {ECO:0000313|EMBL:CDP53784.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
substrate-binding region of ABC-type glycine betaine transport system
SCNpilot_cont_300_bf_scaffold_358_17
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14333..15835
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG74_PELHB rbh
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:KFC71838.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp
hypothetical protein
SCNpilot_cont_300_bf_scaffold_358_18
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15853..16323
DNA (471bp) protein (157aa)
GCN5-like N-acetyltransferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YJF5_9RHIZ
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:CDX39251.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi
acetyltransferase
SCNpilot_cont_300_bf_scaffold_358_19
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16434..16850
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG73_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB77612.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_358_20
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16923..19241
DNA (2319bp) protein (773aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae;
Pyruvate carboxylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG72_PELHB
pyruvate carboxyl transferase
SCNpilot_cont_300_bf_scaffold_358_21
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19181..20320
DNA (1140bp) protein (380aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae;
Pyruvate carboxylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG72_PELHB
pyruvate carboxyl transferase
SCNpilot_cont_300_bf_scaffold_358_22
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20324..20743)
DNA (420bp) protein (140aa)
UPF0310 protein Mesop_1794 n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y6M6_MESOW
UPF0310 protein VW35_04720 {ECO:0000256|HAMAP-Rule:MF_00771}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_358_23
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20806..21114)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG70_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB77615.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_358_24
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21226..21813
DNA (588bp) protein (196aa)
Regulatory protein TetR n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F3M9_SPHCR
regulatory protein TetR
Regulatory protein TetR {ECO:0000313|EMBL:AEG51041.1}; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlo
SCNpilot_cont_300_bf_scaffold_358_25
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21825..22205
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U5R6_9DELT
Endoribonuclease L-PSP {ECO:0000313|EMBL:KKB13218.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
endoribonuclease L-PSP
SCNpilot_cont_300_bf_scaffold_358_26
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22260..22850)
DNA (591bp) protein (197aa)
Nucleoside diphosphate kinase regulator n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3JKB9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL32575.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
rnk1; transcription elongation factor GreA/GreB
SCNpilot_cont_300_bf_scaffold_358_27
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22847..23071)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003631B99
Uncharacterized protein {ECO:0000313|EMBL:KKB80349.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_358_28
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23326..23535)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2E074_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KFL27954.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_358_29
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23675..24913
DNA (1239bp) protein (413aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hyd
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG69_PELHB
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
SCNpilot_cont_300_bf_scaffold_358_30
unknown

Not on your lists

24910..25032
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying items 1-30 of 170 in total

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