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SCNpilot_cont_300_bf_scaffold_1168

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1168_1
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..424)
DNA (423bp) protein (141aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotra
acetylglutamate kinase (EC:2.7.2.8)
acetylglutamate kinase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA1E7
SCNpilot_cont_300_bf_scaffold_1168_2
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(481..1125)
DNA (645bp) protein (215aa)
membrane protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC44A rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO40883.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas c
membrane protein
SCNpilot_cont_300_bf_scaffold_1168_3
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1655..2008
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CC615
DNA, contig: SP638 {ECO:0000313|EMBL:GAN14420.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1168_4
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1995..2417
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CC616
DNA, contig: SP638 {ECO:0000313|EMBL:GAN14419.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
SCNpilot_cont_300_bf_scaffold_1168_5
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2421..2876)
DNA (456bp) protein (152aa)
N-acetyltransferase n=1 Tax=Sphingomonas elodea RepID=UPI000263166B
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AJP73946.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHS
SCNpilot_cont_300_bf_scaffold_1168_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2881..3990)
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003745EEB rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT07301.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas t
SCNpilot_cont_300_bf_scaffold_1168_7
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3987..4595)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3BF5A
Putative lipoprotein {ECO:0000313|EMBL:EZP51176.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp.
lipoprotein
SCNpilot_cont_300_bf_scaffold_1168_8
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4728..4853
DNA (126bp) protein (42aa)
50S ribosomal protein L36 n=8 Tax=Sphingomonadaceae RepID=RL36_SPHAL
rpmJ; 50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000255|HAMAP-Rule:MF_00251}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopy
SCNpilot_cont_300_bf_scaffold_1168_9
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4885..5499
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037503EA
Sphingomonas taxi strain 30a NODE_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26534.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
hydrolase
SCNpilot_cont_300_bf_scaffold_1168_10
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5582..7741
DNA (2160bp) protein (720aa)
TonB-dependent Receptor Plug domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WTV1_9SPHN
TonB-dependent Receptor Plug domain protein {ECO:0000313|EMBL:EZP53357.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" so
TonB-dependent receptor rbh
SCNpilot_cont_300_bf_scaffold_1168_11
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7928..9385)
DNA (1458bp) protein (486aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
pyruvate kinase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC4B5 rbh
pyruvate kinase rbh
SCNpilot_cont_300_bf_scaffold_1168_12
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9523..9819
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289E1F3
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65193.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
SCNpilot_cont_300_bf_scaffold_1168_13
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9951..11261
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036F2409 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHE54991.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
amidohydrolase family protein
SCNpilot_cont_300_bf_scaffold_1168_14
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11290..11529
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Sphingomonas RepID=UPI0002631638
hypothetical protein
UPF0335 protein TS85_22335 {ECO:0000256|HAMAP-Rule:MF_00797}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingo
SCNpilot_cont_300_bf_scaffold_1168_15
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11667..12317
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000380001E
Putative glutathione S-transferase {ECO:0000313|EMBL:GAO39992.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sph
glutathione S-transferase domain-containing protein
SCNpilot_cont_300_bf_scaffold_1168_16
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12429..13730)
DNA (1302bp) protein (434aa)
DNA-binding protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B74A5E
Putative hemolysin {ECO:0000313|EMBL:GAM01099.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapa
DNA-binding protein
SCNpilot_cont_300_bf_scaffold_1168_17
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13863..14549
DNA (687bp) protein (229aa)
OmpA/MotB n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000364B8D3 rbh
Surface antigen family protein {ECO:0000313|EMBL:EZP51082.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingo
membrane protein
SCNpilot_cont_300_bf_scaffold_1168_18
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14664..15521)
DNA (858bp) protein (286aa)
LysR family transcriptional regulator n=1 Tax=Sphingomonas wittichii RepID=UPI0003184593
LysR family transcriptional regulator {ECO:0000313|EMBL:KKC24956.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="S
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1168_19
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15743..16126
DNA (384bp) protein (128aa)
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:BAK65650.1}; EC=1.3.99.10 {ECO:0000313|EMBL:BAK65650.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingom
isovaleryl-CoA dehydrogenase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00035EABF0
isovaleryl-CoA dehydrogenase
SCNpilot_cont_300_bf_scaffold_1168_20
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16123..16899
DNA (777bp) protein (259aa)
isovaleryl-CoA dehydrogenase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3CF7D
isovaleryl-CoA dehydrogenase
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:AIT05923.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomo
SCNpilot_cont_300_bf_scaffold_1168_21
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16838..18439
DNA (1602bp) protein (534aa)
methylcrotonoyl-CoA carboxylase (EC:6.4.1.4)
acetyl-CoA carboxylase subunit beta n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDC43
Acetyl-CoA carboxylase subunit beta {ECO:0000313|EMBL:ESZ86193.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Bla
SCNpilot_cont_300_bf_scaffold_1168_22
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18451..18921
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3481F
Uncharacterized protein {ECO:0000313|EMBL:KHA64884.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1168_23
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18867..20849
DNA (1983bp) protein (661aa)
3-methylcrotonyl-CoA carboxylase subunit alpha n=1 Tax=Sphingomonas elodea RepID=UPI00026303ED
Methylcrotonoyl-CoA carboxylase {ECO:0000313|EMBL:KFD25831.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobi
carbamoyl-phosphate synthase subunit L
SCNpilot_cont_300_bf_scaffold_1168_24
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20852..21304
DNA (453bp) protein (151aa)
MaoC family dehydratase n=1 Tax=Blastomonas sp. AAP53 RepID=UPI000314D51B
Uncharacterized protein {ECO:0000313|EMBL:GAO53908.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
MaoC domain-containing protein dehydratase
SCNpilot_cont_300_bf_scaffold_1168_25
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21423..21872)
DNA (450bp) protein (150aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonada
CMP deaminase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4636B
CMP deaminase
SCNpilot_cont_300_bf_scaffold_1168_26
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


22005..22298
DNA (294bp) protein (98aa)
50S ribosomal protein L28 n=1 Tax=Sphingobium sp. AP49 RepID=J2KYU4_9SPHN
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobi
50S ribosomal protein L28
SCNpilot_cont_300_bf_scaffold_1168_27
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22400..23371)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000370B92C rbh
Sphingomonas taxi strain 30a NODE_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26512.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1168_28
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23507..23881
DNA (375bp) protein (125aa)
Rickettsia 17 kDa surface antigen family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X0E3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAM00151.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas p
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1168_29
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24216..25217
DNA (1002bp) protein (334aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
thrS; threonyl-tRNA synthetase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=SYT_NOVAD
Displaying 29 items

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